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  • Improved maize reference genome with single molecule technologies

    inping Jiao, Paul Peluso, Jinghua Shi, Tiffany Liang, Michelle C. Stitzer, Bo Wang, Michael S. Campbell, Joshua C. Stein, Xuehong Wei, Chen-Shan Chin, Katherine Guill, Michael Regulski, Sunita Kumari, Andrew Olson, Jonathan Gent, Kevin L. Schneider, Thomas K. Wolfgruber, , Plant Cell ,  2017
    Shell

    Free

  • Universal rule for the symmetric division of plant cells

    Sébastien Besson and Jacques Dumais , Plant Cell ,  2011
    Matlab

    Free

  • Hormone Distribution and Transcriptome Profiles in Bamboo Shoots Provide Insights on Bamboo Stem Emergence and Growth

    Rico Gamuyao, Keisuke Nagai, Madoka Ayano, Yoshinao Mori, Anzu Minami, Mikiko Kojima, Takamasa Suzuki, Hitoshi Sakakibara, Tetsuya Higashiyama, Motoyuki Ashikari , Plant Cell ,  2017
    R

    Free

  • MicroRNA Dynamics and Functions During Arabidopsis Embryogenesis

    Alexandra Plotnikova, Max J. Kellner, Michael A. Schon, Magdalena Mosiolek, Michael D. Nodine , Plant Cell ,  2019
    Python

    Free

  • High-Throughput Genotyping of Green Algal Mutants Reveals Random Distribution of Mutagenic Insertion Sites and Endonucleolytic Cleavage of Transforming DNA

    Ru Zhang, Weronika Patena, Ute Armbruster, Spencer S. Gang, Sean R. Blum, Martin C. Jonikas , Plant Cell ,  2014
    Python

    Free

  • Previsual symptoms of Xylella fastidiosa infection revealed in spectral plant-trait alterations

    P. J. Zarco-Tejada, C. Camino, P. S. A. Beck, R. Calderon, A. Hornero, R. Hernández-Clemente, T. Kattenborn, M. Montes-Borrego, L. Susca, M. Morelli, V. Gonzalez-Dugo, P. R. J. North, B. B. Landa, D. Boscia, M. Saponari & J. A. Navas-Cortes , Nature Plants ,  2018
    R

    Free

  • Dynamic thylakoid stacking regulates the balance between linear and cyclic photosynthetic electron transfer

    William H. J. Wood, Craig MacGregor-Chatwin, Samuel F. H. Barnett, Guy E. Mayneord, Xia Huang, Jamie K. Hobbs, C. Neil Hunter & Matthew P. Johnson , Nature Plants ,  2018
    Python

    Free

  • Quantifying soil moisture impacts on light use efficiency across biomes

    Benjamin D. Stocker, Jakob Zscheischler, Trevor F. Keenan, I. Colin Prentice, Josep Peñuelas, Sonia I. Seneviratne , New Phytologist ,  2018
    R

    Free

  • Genomic landscape of the global oak phylogeny

    Andrew L. Hipp, Paul S. Manos, Marlene Hahn, Michael Avishai, Cathérine Bodénès, Jeannine Cavender-Bares, Andrew Crowl, Min Deng, Thomas Denk, Sorel Fitz-Gibbon, Oliver Gailing, M. Socorro González-Elizondo, Antonio González-Rodríguez, eGuido W. Grimm, Xiao-Long Jiang, Antoine Kremer, Isabelle Lesur, John D. McVay, Christophe Plomion, Hernando Rodríguez-Correa, Ernst-Detlef Schulze, Marco C. Simeone, Victoria L. Sork, Susana Valencia-Avalos , New Phytologist ,  2019
    R

    Free

  • Sympatric parallel diversification of major oak clades in the Americas and the origins of Mexican species diversity

    Andrew L. Hipp, Paul S. Manos, Antonio González-Rodríguez, Marlene Hahn, Matthew Kaproth, John D. McVay, Susana Valencia Avalos, Jeannine Cavender-Bares , New Phytologist ,  2017
    R

    Free

  • Pleistocene glacial cycles drive isolation, gene flow and speciation in the high-elevation Andes

    Bruno Nevado, Natalia Contreras-Ortiz, Colin Hughes, Dmitry A. Filatov , New Phytologist ,  1111
    Python

    Free

  • Increased aridity drives post-fire recovery of Mediterranean forests towards open shrublands

    Mara Baudena, Victor M. Santana, M. Jaime Baeza, Susana Bautista, Maarten B. Eppinga, Lia Hemerik, Angeles Garcia Mayor, Francisco Rodriguez, Alejandro Valdecantos, V. Ramon Vallejo , New Phytologist ,  2019
    Fortran

    Free

  • Strong divergent selection at multiple loci in two closely related species of ragworts adapted to high and low elevations on Mount Etna

    Edgar L. Y. Wong, Bruno Nevado, Owen G. Osborne, Alexander S. T. Papadopulos, Jon R. Bridle, Simon J. Hiscock, Dmitry A. Filatov , New Phytologist ,  2019
    Python

    Free

  • Biogeochemical impacts of wildfires over four millennia in a Rocky Mountain subalpine watershed.

    Dunnette, P.V., P.E. Higuera, K.K. McLauchlan, K.M. Derr, C.E. Briles, and M.H. Keefe , New Phytologist ,  2014
    Matlab

    Free

  • Response of Macrophyte Traits to Herbivory and Neighboring Species: Integration of the Functional Trait Framework in the Context of Ecological Invasions

    Lisa Thouvenot, Benoit Gauzens, Jacques Haury, Gabreielle Thiébaut , Frontiers in Plant Science ,  2019
    R

    Free

  • Light Modulates Ethylene Synthesis, Signaling, and Downstream Transcriptional Networks to Control Plant Development

    Alexandria F. Harkey, Gyeong Mee Yoon, Dong Hye Seo, Alison DeLong, Gloria K. Munday , Frontiers in Plant Science ,  2019
    HTML

    Free

  • Parental Expression Variation of Small RNAs Is Negatively Correlated with Grain Yield Heterosis in a Maize Breeding Population

    Felix Seifert, Alexander Thiemann, Robert Grant-Downton, Susanne Edelmann, Dominika Rybka, Tobias A. Schrag, Matthias Frisch, Hugh G. Dickinson, Albrecht E. Melchinger, Stefan Scholten , Frontiers in Plant Science ,  2019
    Java

    Free

  • Plant community assembly along a natural metal gradient in central Africa: Functional and phylogenetic approach

    Guillaume Delhaye, Olivier J. Hardy, Maxime Séleck, Edouard Ilunga wa Ilunga, Grégory Mahy, Pierre Meerts , Journal of Vegetation Science ,  2019
    R

    Free

  • A trade-off between primary and secondary seed dispersal by wind

    Jinlei Zhu, Minghu Liu, Zhiming Xin, Zhimin Liu & Frank M. Schurr , Plant Ecology ,  2019
    R

    Free

  • Plastid phylogenomic analysis of green plants: A billion years of evolutionary history

    Matthew A. Gitzendanner, Pamela S. Soltis, Gane K.-S. Wong, Brad R. Ruhfel, Douglas E. Soltis , Journal of Botany ,  2018
    Perl

    Free

  • ammistability: R package for ranking genotypes based on stability parameters derived from AMMI model

    B.C Ajay, J. Aravind, R. Abdul Fiyaz , Indian Journal of Genetics and Plant Breeding ,  2018
    R

    Free

  • Combined Landsat and L-Band SAR Data Improves Land Cover Classification and Change Detection in Dynamic Tropical Landscapes

    Jose Don T. De Alban, Grant M. Connette, Patrick Oswald, Edward L. Webb , Remote Sensing of Environment ,  2018
    JavaScript

    Free

  • Fmask 4.0: Improved cloud and cloud shadow detection in Landsats 4–8 and Sentinel-2 imagery

    Shi Qiu, Zhe Zhu, Binbin He , Remote Sensing of Environment ,  2019
    Python

    Free

  • Characterizing Forest Change Using Community-Based Monitoring Data and Landsat Time Series

    Ben DeVries , Arun Kumar Pratihast, Jan Verbesselt, Lammert Kooistra, Martin Herold , Remote Sensing of Environment ,  2016
    R

    Free

  • Integrating Analytical Frameworks to Investigate Land-Cover Regime Shifts in Dynamic Landscapes

    Jose Don T. De Alban, Graham W. Prescott, Kevin M. Woods, Johanness Jamaludin, Kyaw Thinn Latt, Cheng Ling Lim, Aye Chan Maung, Edward L. Webb , Remote Sensing of Environment ,  2019
    R

    Free

  • Accounting for non-stationary variance in geostatistical mapping of soil properties

    Alexandre M.J-C Wadoux, Dick J. Brus, Gerard B.M Heuvelink , Geoderma ,  2018
    R

    Free

  • Comparison of Terrain Indices and Landform Classification Procedures in Low-Relief Agricultural Fields

    Derek A. Evans, Karl W. J. Williard, Jon E. Schoonover , Geoderma ,  2016
    Python

    Free

  • A simple plasticity theory for frictional cohesionless soils

    Jean H.Prevost , Soil Dynamics and Earthquake Engineering ,  1985
    C++

    Free

  • A ground motion selection algorithm based on the generalized conditional intensity measure approach

    Brendon A. Bradley , Soil Dynamics and Earthquake Engineering ,  2012
    JavaScript

    Free

  • Reconstructing disturbance zones ahead of the tunnel face by elastic waveform inversion supported by a parametric level-set representation

    Luan T. Nguyen, Tamara Nestorovic , Soil Dynamics and Earthquake Engineering ,  2018
    Matlab

    Free

  • On the Seismic Fragility Assessment of Concrete Gravity Dams in Eastern Canada

    Rocio Segura, Carl Bernier, Ricardo Monteiro , Soil Dynamics and Earthquake Engineering ,  2019
    Matlab

    Free

  • Random Forest as a generic framework for predictive modeling of spatial and spatio-temporal variables

    Tomislav Hengl, Madlene Nassbaum, Marvin N. Wright, Gerard B.M. Heuvelink, Benedikt Gräler , European Journal of Soil Science ,  2018
    R

    Free

  • Soil Property and Class Maps of the Conterminous US at 100 meter Spatial Resolution based on a Compilation of National Soil Point Observations and Machine Learning

    Amanda Ramcharan, Tomislav Hengl, Travis Nauman, Colby Brungard, Sharon Waltman, Skye Wills, James Thompson , Soil Science Society of America Journal ,  2018
    R

    Free

  • A Closed-form Equation for Predicting the Hydraulic Conductivity of Unsaturated Soils

    M. Th. van Genuchten , Soil Science Society of America Journal ,  1980
    Python

    Free

  • Digital Soil Mapping and Modeling at Continental Scales: Finding Solutions for Global Issues

    S. Grunwald, J. A. Thompson, J. L. Boettinger , Soil Science Society of America Journal ,  2011
    R

    Free

  • The Water Availability Tool for Environmental Resources (WATER): A Water-Budget Modeling Approach for Managing Water-Supply Resources in Kentucky—Phase I: Data Processing, Model Development, and Application to Non-Karst Areas

    Tanja N. Williamson, Kenneth R. Odom, Jeremy K. Newson, Aimee C. Downs, Hugh L. Nelson Jr., Peter J. Cinotto, and Mark A. Ayers , Soil Science Society of America Journal ,  2009
    Python

    Free

  • A Bayesian Method for Incorporating Self-Similarity Into Earthquake Slip Inversions

    R.M J. Amey, A..Hooper, R.J. Walters , Solid Earth ,  2018
    MATLAB

    Free

  • Complex Near-Surface Rheology Inferred From the Response of Greater Tokyo to Strong Ground Motions

    Loïc Viens, Marine A. Denolle, Naoshi Hirata, Shigeki Nakagawa , Solid Earth ,  2018
    Python

    Free

  • Primary and Secondary Red Bed Magnetization Constrained by Fluvial Intraclasts

    Nicholas L. Swanson-Hysell, Luke M. Fairchild, Sarah P. Slotznick , Solid Earth ,  2019
    Jupyter Notebook

    Free

  • Moment of truth for the Cerrado hotspot

    Bernardo B. N. Strassburg et. al. , Ecology and Evolution ,  2020
    Mathematica

    Free

  • MetSim: A Python package for estimation and disaggregation of meteorological data

    Andrew R. Bennett, Joseph J. Hamman, Bart Nijssen , Canadian Journal of Forest Research ,  2020
    Python

    Free

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