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A DWT based approach for Image Steganography
Della Baby, Jitha Thomas, Gisny Augustine, Elsa George, Neenu Rosia Michael , International Journal of Applied Science and Engineering , 2015
C++
Free
A minimal view of single-particle imaging with X-ray lasers
N. Duane Loh , Philosophical Transactions of the Royal Society B: Biological Sciences , 2014
C
Free
A New Framework for Cortico-Striatal Plasticity: Behavioural Theory Meets In Vitro Data at the Reinforcement-Action Interface
Kevin N. Gurney, Mark D. Humphries, Peter Redgrave , PLoS Biology , 2015
MATLAB
Free
A New Multi-Scale Measure for Analysing Animal Movement Data
Claire M. Postlethwaite, Pieta Brown, Todd E. Dennis , Journal of Theoretical Biology , 2012
R
Free
A persistent lack of international representation on editorial boards in environmental biology
Johanna Espin, Sebastian Palmas, Farah Carrasco-Rueda, Kristina Riemer, Pablo E. Allen, Nathan Berkebile, Kirsten A. Hecht, Kay Kastner-Wilcox, Mauricio M. Núñez-Regueiro, Candice Prince, Constanza Rios, Erica Ross, Bhagatveer Sangha, Tia Tyler, Judit Ungvari-Martin, Mariana Villegas, Tara T. Cataldo, Emilio M. Bruna , PLoS Biology , 2017
R
Free
A revision of Australian Thrasorinae (Hymenoptera: Figitidae) with a description of a new genus and six new species
Matthew L Buffington , Proceedings of the Linnean Society of New South Wales , 2008
PHP
Free
A Robust Species Tree for the Alphaproteobacteria
Kelly P. Williams, Bruno W. Sobral, Allan W. Dickerman , Proceedings of the Royal Society B: Biological Sciences , 2007
Jupyter Notebook
Free
Abundance of common species, not species richness, drives delivery of a real-world ecosystem service
Rachael Winfree, Jeremy W. Fox, Neal M. Williams, James R. Reilly, Daniel P. Cariveau , Ecosystem Services , 2015
R
Free
Adaptive credible intervals on stratigraphic ranges when recovery potential is unknown
Steve C. Wang, Philip J. Everson, Heather Jianan Zhou, Dasol Park, David J. Chudzicki , Paleobiology , 2016
R
Free
Arbovirus coinfection and co-transmission: A neglected public health concern?
Chantal B. F. Vogels, Claudia Rückert, Sean M. Cavany, T. Alex Perkins, Gregory D. Ebel, Nathan D. Grubaugh , PLoS Biology , 2019
Python
Free
Asymmetric sampling in human auditory cortex reveals spectral processing hierarchy
Jérémy Giroud, Agnès Trébuchon, Daniele Schön, Patrick Marquis, Catherine Liegeois-Chauvel, David Poeppel, Benjamin Morillon , PLoS Biology , 2020
Jupyter Notebook
Free
Bayesian Analysis of 210Pb Dating
Marco A. Aquino-López, Maarten Blaauw, J. Andrés Christen, Nicole K. Sanderson , Journal of Agricultural, Biological, and Environmental Statistics , 2018
C++
Free
Bayesian and parsimony approaches reconstruct informative trees from simulated morphological datasets
Martin R. Smith , Biological Letters , 2019
Perl
Free
Bayesian and parsimony approaches reconstruct informative trees from simulated morphological datasets
Martin R. Smith , Biology Letters , 2019
Perl
Free
Bayesian phylogenetic analysis supports an agricultural origin of Japonic languages
Sean Lee, Toshikazu Hasegawa , Proceedings of the Royal Society B: Biological Sciences , 2011
Python
Free
Beyond Bar and Line Graphs: Time for a New Data Presentation Paradigm
Tracey L. Weissgerber, Natasa M. Milic, Stacey J. Winham, Vesna D. Garovic , PLoS Biology , 2015
HTML
Free
BioC: A minimalist approach to interoperability for biomedical text processing
D. C. Comeau, R. Islamaj Dogan, P. Ciccarese, K. B. Cohen, M. Krallinger, F. Leitner, Z. Lu, Y. Peng, F. Rinaldi, M. Torii, A. Valencia, K. Verspoor, T. C. Wiegers, C. H. Wu, W. J. Wilbur , Database : the journal of biological databases and curation , 2013
Java
Free
BioNames: linking taxonomy, texts, and trees
Roderic D.M. Page , Proceedings of the Royal Society B: Biological Sciences , 2013
DOT
Free
blend4php: a PHP API for galaxy
Connor Wytko, Brian Soto, Stephen P. Ficklin , Database : the journal of biological databases and curation , 2016
PHP
Free
CACNA1C gene regulates behavioral strategies in operant rule learning
Georgia Koppe, Anne Stephanie Mallien, Stefan Berger, Dusan Bartsch, Peter Gass, Barbara Vollmayr, Daniel Durstewitz , PLoS Biology , 2017
Matlab
Free
Characterizing change points and continuous transitions in movement behaviours using wavelet decomposition
Ali Soleymani, Frank Pennekamp, Somayeh Dodge, Robert Weibel , Philosophical Transactions of the Royal Society B: Biological Sciences , 2017
R
Free
Clownfishes evolution below and above the species level
Jonathan Rolland, Daniele Silvestro, Glenn Litsios, Laurélène Faye, Nicolas Salamin , Proceedings of the Royal Society B: Biological Sciences , 2018
Python
Free
Confidence Limits for Regression Relationships between Distance Matrices: Estimating Gene Flow with Distance
Ralph T. Clarke, Peter Rothery, Alan F. Raybould , Journal of Agricultural, Biological, and Environmental Statistics , 2002
R
Free
Correlations in the population structure of music, genes and language
Steven Brown, Patrick E. Savage, Albert Min-Shan Ko, Mark Stoneking, Ying-Chin Ko, Jun-Hun Loo, Jean A. Trejaut , Proceedings of the Royal Society B: Biological Sciences , 2013
R
Free
Corrigendum to A mathematical model of spontaneous calcium(II) oscillations in astrocytes J. Theor. Biol. 251 (2008)
Maxim Lavrentovich, Sheryl Hemkin , Journal of Theoretical Biology , 2008
Jupyter Notebook
Free
DAISIE: Dynamical Assembly of Islands by Speciation, Immigration and Extinction
Rampal Etienne, Luis Lima Valente, Albert B. Phillimore, Bart Haegeman, Joshua Lambert, Pedro Neves, Shu Xie, Richèl Bilderbeek , Proceedings of the Royal Society B: Biological Sciences , 2020
R
Free
DAISIE: Dynamical Assembly of Islands by Speciation, Immigration and Extinction
Rampal Etienne, Luis Lima Valente, Albert B. Phillimore, Bart Haegeman, Joshua Lambert, Pedro Neves, Shu Xie, Richèl Bilderbeek , Proceedings of the Royal Society B: Biological Sciences , 2020
R
Free
Decoupling of Nuclear Division Cycles and Cell Size during the Coenocytic Growth of the Ichthyosporean Sphaeroforma arctica
Andrej Ondracka, Omaya Dudin, Iñaki Ruiz-Trillo , Current Biology , 2018
R
Free
Deep Predictive Coding for Spatiotemporal Representation Learning
Marcio Fonseca , Philosophical Transactions of the Royal Society B: Biological Sciences , 2018
Jupyter Notebook
Free
Dynamic Signal Compression for Robust Motion Vision in Flies
Michael S. Drews, Aljoscha Leonhardt, Nadezhda Pirogova, Florian G. Richter, Anna Schuetzenberger, Lukas Braun, Etienne Serbe, Alexander Borst , Current Biology , 2020
Python
Free
Efficient method for estimating the number of communities in a network
Maria A. Riolo, George T. Cantwell, Gesine Reinert, M. E. J. Newman , Journal of Theoretical Biology , 2017
C
Free
Efficient Modelling of Presence-Only Species Data via Local Background Sampling
Jeffrey Daniel, Julie Horrocks, Gary J. Umphrey , Journal of Agricultural, Biological, and Environmental Statistics , 2019
R
Free
Empirical Bayes Analysis of RNA-seq Data for Detection of Gene Expression Heterosis
Jarad Niemi, Eric Mittman, Will Landau, Dan Nettleton , Journal of Agricultural, Biological, and Environmental Statistics , 2015
PostScript
Free
Environmental variation impacts trait expression and selection in the legume–rhizobium symbiosis
Rebecca T. Batstone, Madeline A. E. Peters, Anna K. Simonsen, John R. Stinchcombe, Megan E. Frederickson , Symbiosis , 2020
R
Free
Estimating Willingness to Pay for E85 in the United States Using an Intercept Survey of Flex Motorists
Sébastien Pouliot, Kenneth A. Liao, Bruce A. Babcock , American Journal of Agricultural Economics , 2018
R
Free
FUNGuild: An open annotation tool for parsing fungal community datasets by ecological guild
Nhu H. Nguyen, Zewei Song, Scott T. Bates, Sara Branco, Leho Tedersoo, Jon Menke, Jonathan S. Schilling, Peter G. Kennedy , Proceedings of the Royal Society B: Biological Sciences , 2015
Python
Free
Genix: a new online automated pipeline for bacterial genome annotation
Frederico Schmitt Kremer, Marcus Redü Eslabão, Odir Antônio Dellagostin, Luciano da Silva Pinto , Database : the journal of biological databases and curation , 2016
C
Free
Gravity Inversion of Talwani Model using Very Fast Simulated Annealing
Wahyu Srigutomo, Mohammad Heriyanto, Muhamad Hilmi Aufa , Journal of Mathematical and Fundamental Sciences , 2019
MATLAB
Free
Hierarchical Bayesian models for small area estimation of county-level private forest landowner population
Neil R. Ver Planck, Andrew O. Finley, Emily Silver Huff , CANADIAN JOURNAL OF FOREST RESEARCH , 2017
R
Free
Horizontal cooling towers: riverine ecosystem services and the fate of thermoelectric heat in the contemporary Northeast US
Robert J Stewart, Wilfred M Wollheim, Ariel Miara, Charles J Vörösmarty, Balazs Fekete, Richard B Lammers, Bernice Rosenzweig , Ecosystem Services , 2013
C
Free
How ‘Circumpolar’ is Ainu Music? Musical and Genetic Perspectives on the History of the Japanese Archipelago
Patrick E. Savage, Hiromi Matsumae, Hiroki Oota, Mark Stoneking, Thomas E. Currie, Atsushi Tajima, Matt Gillan, Steven Brown , Proceedings of the Royal Society B: Biological Sciences , 2015
R
Free
How should we estimate diversity in the fossil record? Testing richness estimators using sampling-standardised discovery curves
Roger A. Close, Serjoscha W. Evers, John Alroy, Richard J. Butler , Paleobiology , 2018
R
Free
How to make more out of community data? A conceptual framework and its implementation as models and software
Otso Ovaskainen, Gleb Tikhonov, Anna Norberg, F. Guillaume Blanchet, Leo Duan, David Dunson, Tomas Roslin, Nerea Abrego , Proceedings of the Royal Society B: Biological Sciences , 2017
R
Free
Hydrothermal systems in small ocean planets
Steve Vance, Jelte Harnmeijer, Jun Kimura, Hauke Hussmann, Brian deMartin, J. Michael Brown , Astrobiology , 2007
MATLAB
Free
Impact of translation on named-entity recognition in radiology texts
Luís Campos, Vasco Pedro, Francisco Couto , Database : the journal of biological databases and curation , 2017
Python
Free
Inherent limits of light-level geolocation may lead to overinterpretation
Simeon Lisovski, Heiko Schmaljohann, Eli S. Bridge, Silke Bauer, Andrew Farnsworth, Sidney A. Gauthreaux, Steffen Hahn, Michael T. Hallworth, Chris M. Hewson, Jeffrey F. Kelly, Felix Liechti, Peter P. Marra, Eldar Rakhimberdiev, Jeremy D. Ross, Nathaniel E. Seavy, Michael D. Sumner, Caz M. Taylor, David W. Winkler, Simon J. Wotherspoon, Michael B. Wunder , Current Biology , 2018
R
Free
Insights into the roles of CMK-1 and OGT-1 in interstimulus interval-dependent habituation in Caenorhabditis elegans
Evan L. Ardiel, Troy A. McDiarmid, Tiffany A. Timbers, Kirsten C. Y. Lee, Javad Safaei, Steven L. Pelech, Catharine H. Rankin , Proceedings of the Royal Society B: Biological Sciences , 2018
Matlab
Free
Intrinsic and realized generation intervals in infectious-disease transmission
David Champredon, Jonathan Dushoff , Proceedings of the Royal Society B: Biological Sciences , 2015
R
Free
iSimp in BioC standard format: Enhancing the interoperability of a sentence simplification system
Y. Peng, C. O. Tudor, M. Torii, C. H. Wu, K. Vijay-Shanker , Database : the journal of biological databases and curation , 2014
Python
Free
Large-scale Automated Machine Reading Discovers New Cancer Driving Mechanisms
Marco A Valenzuela-Escárcega, Özgün Babur, Gus Hahn-Powell, Dane Bell, Thomas Hicks, Enrique Noriega-Atala, Xia Wang, Mihai Surdeanu, Emek Demir, Clayton T Morrison , Database : the journal of biological databases and curation , 2018
Scala
Free
Leveraging prior knowledge for protein–protein interaction extraction with memory network
Huiwei Zhou, Zhuang Liu, Shixian Ning, Yunlong Yang, Chengkun Lang, Yingyu Lin, Kun Ma , Database : the journal of biological databases and curation , 2018
Python
Free
Long-term temporal and spatial trends in eutrophication status of the Baltic Sea
Jesper H. Andersen, Jacob Carstensen, Daniel J. Conley, Karsten Dromph, Vivi Fleming-Lehtinen, Bo G. Gustafsson, Alf B. Josefson, Alf Norkko, Anna Villnäs, Ciarán Murray , Biological Reviews , 2015
R
Free
Maintenance of High Genome Integrity over Vegetative Growth in the Fairy-Ring Mushroom Marasmius oreades
Markus Hiltunen, Magdalena Grudzinska-Sterno, Ola Wallerman, Martin Ryberg, Hanna Johannesson , Current Biology , 2019
Python
Free
Management and control of invasive brown hares (Lepus europaeus): contrasting attitudes of selected environmental stakeholders and the wider rural community
Anthony Caravaggi, Ian Montgomery, Neil Reid , Biology and Environment , 2017
R
Free
Manipulating plant phylogenetic diversity for green roof ecosystem service delivery
J. Scott MacIvor, Nicholas Sookhan, Carlos A. Arnillas, Anushree Bhatt, Shameek Das, Simone-Louise E. Yasui, Garland Xie, Marc W. Cadotte , Evolutionary Applications , 2018
R
Free
Marine Dispersal Scales Are Congruent over Evolutionary and Ecological Time
Malin L. Pinsky, Pablo Saenz-Agudelo, Océane C. Salles, Glenn R. Almany, Michael Bode, Michael L. Berumen, Serge Andréfouët, Simon R. Thorrold, Geoffrey P. Jones, Serge Planes , Current Biology , 2016
R
Free
Massively parallel single-cell chromatin landscapes of human immune cell development and intratumoral T cell exhaustion
Kathryn E. Yost, Ansuman T. Satpathy, Daniel K. Wells, Yanyan Qi, Chunlin Wang, Robin Kageyama, Katherine McNamara, Jeffrey M. Granja, Kavita Y. Sarin, Ryanne A. Brown, Rohit K. Gupta, Christina Curtis, Samantha L. Bucktrout, Mark M. Davis, Anne Lynn S. Chang, Howard Y. Chang , Granja , 2019
R
Free
Mate choice, reproductive success and inbreeding in white rhinos
Petra Kretzschmar, Hailie Auld, Peter Boag, Udo Gansloßer, Candace Scott, Peter John Van Coeverden de Groot, Alexandre Courtiol , Evolutionary Applications , 2019
R
Free
Mitochondria and hydrogenosomes are two forms of the same fundamental organelle
Martin Embley, Mark van der Giezen, David S. Horner, Patricia L. Dyal, Peter Foster , Philosophical Transactions of the Royal Society B: Biological Sciences , 2003
Perl
Free
Modeling the population dynamics of lemon sharks
J. K. Baum , Biology Direct , 2003
R
Free
momentuHMM: R package for generalized hidden Markov models of animal movement
Brett T. McClintock, Théo Michelot , Journal of Agricultural, Biological, and Environmental Statistics , 2018
R
Free
momentuHMM: R package for generalized hidden Markov models of animal movement
Brett T. McClintock, Théo Michelot , Journal of Agricultural, Biological, and Environmental Statistics , 2018
R
Free
Network 'small-world-ness': A quantitative method for determining canonical network equivalence
Mark D. Humphries, Kevin Gurney , Proceedings of the Royal Society B: Biological Sciences , 2008
Matlab
Free
Network structure and biodiversity loss in food webs: robustness increases with connectance
Jennifer A. Dunne, Richard J. Williams, Neo D. Martinez , Philosophical Transactions of the Royal Society B: Biological Sciences , 2003
R
Free
Non-coding cancer driver candidates identified with a sample- and position-specific model of the somatic mutation rate
Malene Juul, Johanna Bertl, Qianyun Guo, Morten Muhlig Nielsen, Michał Świtnicki, Henrik Hornshøj, Tobias Madsen, Asger Hobolth, Jakob Skou Pedersen , Biometrika , 2017
R
Free
On inverse probability-weighted estimators in the presence of interference
L. Liu, M. G. Hudgens, S. Becker-Dreps , Biometrika , 2016
R
Free
Optimal control of acute myeloid leukaemia
Jesse A. Sharp, Alexander P Browning, Tarunendu Mapder, Kevin Burrage, Matthew J Simpson , Journal of Theoretical Biology , 2019
MATLAB
Free
Overlap among Spatial Memories Triggers Repulsion of Hippocampal Representations
Avi J.H. Chanales, Ashima Oza, Serra E. Favila, Brice A. Kuhl , Current Biology , 2017
Jupyter Notebook
Free
Persistent single neuron activity during working memory in the human medial temporal lobe
Simon Kornblith, Rodrigo Quian Quiroga, Christof Koch, Itzhak Fried, Florian Mormann , Current Biology , 2017
Jupyter Notebook
Free
Point-based Mark-Recapture Distance Sampling
J. L. Laake, B. A. Collier, M. L. Morrison, R. N. Wilkins , Journal of Agricultural, Biological, and Environmental Statistics , 2011
R
Free
Policy Shocks and Market-Based Regulations: Evidence from the Renewable Fuel Standard
Gabriel E. Lade, C.‐Y. Cynthia Lin Lawell, Aaron Smith , American Journal of Agricultural Economics , 2017
Stata
Free
Predominant contribution of L-type Cav1.2 channel stimulation to impaired intracellular calcium and cerebral artery vasoconstriction in diabetic hyperglycemia
Stefano Morotti, Madeline Nieves-Cintrón, Matthew A. Nystoriak, Manuel F. Navedo, Eleonora Grandi , Journal of Theoretical Biology , 2017
MATLAB
Free
Principal weighted support vector machines for sufficient dimension reduction in binary classification
Seung Jun Shin, Yichao Wu, Hao Helen Zhang, Yufeng Liu , Biometrika , 2016
R
Free
Prolonged Intracellular Na+ Dynamics Govern Electrical Activity in Accessory Olfactory Bulb Mitral Cells
Asaph Zylbertal, Anat Kahan, Yoram Ben-Shaul, Yosef Yarom, Shlomo Wagner , PLoS Biology , 2015
Python
Free
Quantification and discovery of sequence determinants of protein per mRNA amount in 29 human tissues
Eraslan et al. , Molecular Systems Biology , 2019
R
Free
Reconciling Conflicting Phylogenies in the Origin of Sweet Potato and Dispersal to Polynesia
Pablo Muñoz-Rodríguez, Tom Carruthers, John R.I. Wood, Bethany R.M. Williams, Kevin Weitemier, Brent Kronmiller, David Ellis, Noelle L. Anglin, Lucas Longway, Stephen A. Harris, Mark D. Rausher, Steven Kelly, Aaron Liston, Robert W. Scotland , Current Biology , 2018
Python
Free
Recruit symbiosis establishment and Symbiodiniaceae composition influenced by adult corals and reef sediment
A. Ali, N. G. Kriefall, L. E. Emery, C. D. Kenkel, M. V. Matz, S. W. Davies , Symbiosis , 2019
R
Free
Restriction site-associated DNA sequencing (RAD-seq) reveals an extraordinary number of transitions among gecko sex-determining systems
Tony Gamble, Jessi Coryell, Tariq Ezaz, Joshua Lynch, Daniel P. Scantlebury, David Zarkower , Biology Letters , 2015
Python
Free
RiceAtlas, a spatial database of global rice calendars and production
Alice G. Laborte, Mary Anne Gutierrez, +10 authors Andrew Nelson , Scientific data , 2017
R
Free
Robust algorithm to generate a diverse class of dense disordered and ordered sphere packings via linear programming
S. Torquato, Y. Jiao , Philosophical Transactions of the Royal Society B: Biological Sciences , 2010
Python
Free
Sequence memory for prediction, inference and behaviour
Jeff Hawkins, Dileep George, Jamie Niemasik , Philosophical Transactions of the Royal Society B: Biological Sciences , 2009
C++
Free
Serial passaging causes extensive positive selection in seasonal influenza A hemagglutinin
Claire D. McWhite, Austin G. Meyer, Claus O. Wilke , BioScience , 2016
HyPhy
Free
Service Path Attribution Networks (SPANs): Spatially Quantifying the Flow of Ecosystem Services from Landscapes to People
Gary W. Johnson, Kenneth J. Bagstad, Robert R. Snapp, Ferdinando Villa , Ecosystem Services , 2010
Clojure
Free
Short-term acclimation of the photosynthetic electron transfer chain to changing light: a mathematical model
Oliver Ebenhöh, Geoffrey Fucile, Giovanni Finazzi, Jean-David Rochaix, Michel Goldschmidt-Clermont , Philosophical Transactions of the Royal Society B: Biological Sciences , 2014
Python
Free
Simpler grammar, larger vocabulary: How population size affects language
Florencia Reali, Nick Chater, Morten H. Christiansen , Proceedings of the Royal Society B: Biological Sciences , 2018
R
Free
Single-cell methylomes identify neuronal subtypes and regulatory elements in mammalian cortex
Chongyuan Luo, Christopher L. Keown, Laurie Kurihara, Jingtian Zhou, Yupeng He, Junhao Li, Rosa Castanon, Jacinta Lucero, Joseph R. Nery, Justin P. Sandoval, Brian Bui, Terrence J. Sejnowski, Timothy T. Harkins, Eran A. Mukamel, M. Margarita Behrens, Joseph R. Ecker , BioScience , 2017
Python
Free
Spatial Memory Engram in the Mouse Retrosplenial Cortex
Michal M. Milczarek, Seralynne D. Vann, Frank Sengpiel , Current Biology , 2018
Matlab
Free
SPIKE: Stata module to allow for a zero willingness to pay
Joao Pedro Azevedo , American Journal of Agricultural Economics , 2010
Stata
Free
Taxonomy as impediment: synonymy and its impact on the Global Biodiversity Information Facility's database
Roderic D. M. Page , Bulletin of the American Museum of Natural History , 2013
PHP
Free
The brainstem reticular formation is a small-world, not scale-free, network
M.D Humphries, K Gurney, T.J Prescott , Proceedings of the Royal Society B: Biological Sciences , 2005
MATLAB
Free
The Development of Sociobiology in Relation to Animal Behavior Studies, 1946-1975
Clement Levallois , Journal of the History of Biology , 2017
Java
Free
The Food Web of Potter Cove (Antarctica): complexity, structure and function
Tomás I. Marina, Vanesa Salinas, Georgina Cordone, Gabriela Campana, Eugenia Moreira, Dolores Deregibus, Luciana Torre, Ricardo Sahade, Marcos Tatián, Esteban Barrera Oro, Marleen De Troch, Santiago Doyle, María Liliana Quartino, Leonardo A. Saravia, Fernando R. Momo , Proceedings of the Royal Society B: Biological Sciences , 2017
R
Free
The Origin of Glucocorticoid Hormone Oscillations
Jamie J. Walker, Francesca Spiga, Eleanor Waite, Zidong Zhao, Yvonne Kershaw, John R. Terry, Stafford L. Lightman , PLoS Biology , 2012
R
Free
The Role of Information in Agricultural Technology Adoption: Experimental Evidence from Rice Farmers in Uganda
Bjorn Van Campenhout , ECONOMIC DEVELOPMENT AND CULTURAL CHANGE , 2019
R
Free
The role of nitric oxide in neurovascular coupling
K. Dormanns, R.G. Brown, T. David , Journal of Theoretical Biology , 2016
MATLAB
Free
Timescales of influenza A/H3N2 antibody dynamics
Adam J. Kucharski, Justin Lessler, Derek A. T. Cummings, Steven Riley , PLoS Biology , 2018
R
Free
Transfer Learning in Biomedical Natural Language Processing: An Evaluation of BERT and ELMo on Ten Benchmarking Datasets
Yifan Peng, Shankai Yan, Zhiyong Lu , Database : the journal of biological databases and curation , 2019
Python
Free
Transit visibility zones of the Solar system planets
R. Wells, K. Poppenhaeger, C. A. Watson, R. Heller , Astrobiology , 2017
Python
Free
Transmission Dynamics and Prospects for the Elimination of Canine Rabies
Katie Hampson, Jonathan Dushoff, Sarah Cleaveland, Daniel T Haydon, Magai Kaare, Craig Packer, Andy Dobson , PLoS Biology , 2009
PostScript
Free
Trophic interactions modify the temperature dependence of community biomass and ecosystem function
Jessica Garzke, Stephanie J. Connor, Ulrich Sommer, Mary I. O’Connor , PLoS Biology , 2019
R
Free

A DWT based approach for Image Steganography

A minimal view of single-particle imaging with X-ray lasers

A New Framework for Cortico-Striatal Plasticity: Behavioural Theory Meets In Vitro Data at the Reinforcement-Action Interface

A New Multi-Scale Measure for Analysing Animal Movement Data

A persistent lack of international representation on editorial boards in environmental biology

A revision of Australian Thrasorinae (Hymenoptera: Figitidae) with a description of a new genus and six new species

A Robust Species Tree for the Alphaproteobacteria

Abundance of common species, not species richness, drives delivery of a real-world ecosystem service

Adaptive credible intervals on stratigraphic ranges when recovery potential is unknown

Arbovirus coinfection and co-transmission: A neglected public health concern?

Asymmetric sampling in human auditory cortex reveals spectral processing hierarchy

Bayesian Analysis of 210Pb Dating

Bayesian and parsimony approaches reconstruct informative trees from simulated morphological datasets

Bayesian and parsimony approaches reconstruct informative trees from simulated morphological datasets

Bayesian phylogenetic analysis supports an agricultural origin of Japonic languages

Beyond Bar and Line Graphs: Time for a New Data Presentation Paradigm

BioC: A minimalist approach to interoperability for biomedical text processing

BioNames: linking taxonomy, texts, and trees

blend4php: a PHP API for galaxy

CACNA1C gene regulates behavioral strategies in operant rule learning

Characterizing change points and continuous transitions in movement behaviours using wavelet decomposition

Clownfishes evolution below and above the species level

Confidence Limits for Regression Relationships between Distance Matrices: Estimating Gene Flow with Distance

Correlations in the population structure of music, genes and language

Corrigendum to A mathematical model of spontaneous calcium(II) oscillations in astrocytes J. Theor. Biol. 251 (2008)

DAISIE: Dynamical Assembly of Islands by Speciation, Immigration and Extinction

DAISIE: Dynamical Assembly of Islands by Speciation, Immigration and Extinction

Decoupling of Nuclear Division Cycles and Cell Size during the Coenocytic Growth of the Ichthyosporean Sphaeroforma arctica

Deep Predictive Coding for Spatiotemporal Representation Learning

Dynamic Signal Compression for Robust Motion Vision in Flies

Efficient method for estimating the number of communities in a network

Efficient Modelling of Presence-Only Species Data via Local Background Sampling

Empirical Bayes Analysis of RNA-seq Data for Detection of Gene Expression Heterosis

Environmental variation impacts trait expression and selection in the legume–rhizobium symbiosis

Estimating Willingness to Pay for E85 in the United States Using an Intercept Survey of Flex Motorists

FUNGuild: An open annotation tool for parsing fungal community datasets by ecological guild

Genix: a new online automated pipeline for bacterial genome annotation

Gravity Inversion of Talwani Model using Very Fast Simulated Annealing

Hierarchical Bayesian models for small area estimation of county-level private forest landowner population

Horizontal cooling towers: riverine ecosystem services and the fate of thermoelectric heat in the contemporary Northeast US

How ‘Circumpolar’ is Ainu Music? Musical and Genetic Perspectives on the History of the Japanese Archipelago

How should we estimate diversity in the fossil record? Testing richness estimators using sampling-standardised discovery curves

How to make more out of community data? A conceptual framework and its implementation as models and software

Hydrothermal systems in small ocean planets

Impact of translation on named-entity recognition in radiology texts

Inherent limits of light-level geolocation may lead to overinterpretation

Insights into the roles of CMK-1 and OGT-1 in interstimulus interval-dependent habituation in Caenorhabditis elegans

Intrinsic and realized generation intervals in infectious-disease transmission

iSimp in BioC standard format: Enhancing the interoperability of a sentence simplification system

Large-scale Automated Machine Reading Discovers New Cancer Driving Mechanisms

Leveraging prior knowledge for protein–protein interaction extraction with memory network

Long-term temporal and spatial trends in eutrophication status of the Baltic Sea

Maintenance of High Genome Integrity over Vegetative Growth in the Fairy-Ring Mushroom Marasmius oreades

Management and control of invasive brown hares (Lepus europaeus): contrasting attitudes of selected environmental stakeholders and the wider rural community

Manipulating plant phylogenetic diversity for green roof ecosystem service delivery

Marine Dispersal Scales Are Congruent over Evolutionary and Ecological Time

Massively parallel single-cell chromatin landscapes of human immune cell development and intratumoral T cell exhaustion

Mate choice, reproductive success and inbreeding in white rhinos

Mitochondria and hydrogenosomes are two forms of the same fundamental organelle

Modeling the population dynamics of lemon sharks

momentuHMM: R package for generalized hidden Markov models of animal movement

momentuHMM: R package for generalized hidden Markov models of animal movement

Network 'small-world-ness': A quantitative method for determining canonical network equivalence

Network structure and biodiversity loss in food webs: robustness increases with connectance

Non-coding cancer driver candidates identified with a sample- and position-specific model of the somatic mutation rate

On inverse probability-weighted estimators in the presence of interference

Optimal control of acute myeloid leukaemia

Overlap among Spatial Memories Triggers Repulsion of Hippocampal Representations

Persistent single neuron activity during working memory in the human medial temporal lobe

Point-based Mark-Recapture Distance Sampling

Policy Shocks and Market-Based Regulations: Evidence from the Renewable Fuel Standard

Predominant contribution of L-type Cav1.2 channel stimulation to impaired intracellular calcium and cerebral artery vasoconstriction in diabetic hyperglycemia

Principal weighted support vector machines for sufficient dimension reduction in binary classification

Prolonged Intracellular Na+ Dynamics Govern Electrical Activity in Accessory Olfactory Bulb Mitral Cells

Quantification and discovery of sequence determinants of protein per mRNA amount in 29 human tissues

Reconciling Conflicting Phylogenies in the Origin of Sweet Potato and Dispersal to Polynesia

Recruit symbiosis establishment and Symbiodiniaceae composition influenced by adult corals and reef sediment

Restriction site-associated DNA sequencing (RAD-seq) reveals an extraordinary number of transitions among gecko sex-determining systems

RiceAtlas, a spatial database of global rice calendars and production

Robust algorithm to generate a diverse class of dense disordered and ordered sphere packings via linear programming