-
Network structure and biodiversity loss in food webs: robustness increases with connectance
Jennifer A. Dunne, Richard J. Williams, Neo D. Martinez , Marine Ecology - Progress Series , 2003RFree
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The Food Web of Potter Cove (Antarctica): complexity, structure and function
Tomás I. Marina, Vanesa Salinas, Georgina Cordone, Gabriela Campana, Eugenia Moreira, Dolores Deregibus, Luciana Torre, Ricardo Sahade, Marcos Tatián, Esteban Barrera Oro, Marleen De Troch, Santiago Doyle, María Liliana Quartino, Leonardo A. Saravia, Fernando R. Momo , Estuarine, Coastal and Shelf Science , 2017RFree
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FUNGuild: An open annotation tool for parsing fungal community datasets by ecological guild
Nhu H. Nguyen, Zewei Song, Scott T. Bates, Sara Branco, Leho Tedersoo, Jon Menke, Jonathan S. Schilling, Peter G. Kennedy , Deep-Sea Research Part I: Oceanographic Research Papers , 2015PythonFree
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Recruit symbiosis establishment and Symbiodiniaceae composition influenced by adult corals and reef sediment
A. Ali, N. G. Kriefall, L. E. Emery, C. D. Kenkel, M. V. Matz, S. W. Davies , Coral Reefs , 2019RFree
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Accounting for variable recruitment and fishing mortality in length-based stock assessments for data-limited fisheries
Merrill B. Rudd, James T. Thorson , Canadian Journal of Fisheries and Aquatic Sciences , 2017RFree
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Spatial semiparametric models improve estimates of species abundance and distribution
Andrew Olaf Shelton, James T. Thorson, Eric J. Ward, Blake E. Feist , ICES Journal of Marine Science , 2014RFree
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Spatial semiparametric models improve estimates of species abundance and distribution
Andrew Olaf Shelton, James T. Thorson, Eric J. Ward, Blake E. Feist , Canadian Journal of Fisheries and Aquatic Sciences , 2014RFree
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Joint dynamic species distribution models: a tool for community ordination and spatiotemporal monitoring
James T. Thorson, James N. Ianelli, Elise A. Larsen, Leslie Ries, Mark D. Scheuerell, Cody Szuwalski, Elise F. Zipkin , Canadian Journal of Fisheries and Aquatic Sciences , 2016C++Free
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Improving estimates of population status and trend with superensemble models
Sean C Anderson, Andrew B Cooper, Olaf P Jensen, Cóilín Minto, James T Thorson, Jessica C Walsh, Jamie Afflerbach, Mark Dickey-Collas, Kristin M Kleisner, Catherine Longo, Giacomo Chato Osio, Daniel Ovando, Iago Mosqueira, Andrew A Rosenberg, Elizabeth R Selig , Canadian Journal of Fisheries and Aquatic Sciences , 2017RFree
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Black swans in space: modelling spatiotemporal processes with extremes
Sean C. Anderson, Eric J. Ward , Canadian Journal of Fisheries and Aquatic Sciences , 2018C++Free
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A multi-year hierarchical Bayesian mark-recapture model using recurring salmonid behavior to account for sparse or missing data
Bryce N. Oldemeyer, Timothy Copeland, Brian P. Kennedy , Canadian Journal of Fisheries and Aquatic Sciences , 2018RFree
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Validation of a hidden Markov model for the geolocation of Atlantic cod
Chang Liu, Geoffrey W. Cowles, Douglas R. Zemeckis, Steven X. Cadrin, Micah J. Dean , Canadian Journal of Fisheries and Aquatic Sciences , 2017MatlabFree
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Smoothing Population Size Estimates for Time-Stratified Mark-Recapture Experiments Using Bayesian P-Splines
Simon J. Bonner, Carl J. Schwarz , Canadian Journal of Fisheries and Aquatic Sciences , 2011RFree
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Spatial delay-difference models for estimating spatiotemporal variation in juvenile production and population abundance
James T. Thorson, James N. Ianelli, Stephan B. Munch, Kotaro Ono, Paul D. Spencer , Canadian Journal of Fisheries and Aquatic Sciences , 2015C++Free
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Nonstationary effects of ocean temperature on Pacific salmon productivity
Michael A. Litzow, Lorenzo Ciannelli, Curry J. Cunningham, Bethany Johnson, Patricia Puerta , Canadian Journal of Fisheries and Aquatic Sciences , 2019RFree
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No-take marine reserves can enhance population persistence and support the fishery of abalone
Marisa Rossetto, Fiorenza Micheli, Andrea Saenz-Arroyo, Jose Antonio Espinoza Montes, Giulio Alessandro De Leo , Canadian Journal of Fisheries and Aquatic Sciences , 2015RFree
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Determination of fish movement patterns from tag recoveries using maximum likelihood estimators
Ray Hilborn , Canadian Journal of Fisheries and Aquatic Sciences , 2008RFree
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Accounting for variable recruitment and fishing mortality in length-based stock assessments for data-limited fisheries
Merrill B. Rudd, James T. Thorson , Canadian Journal of Fisheries and Aquatic Sciences , 2017RFree
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Empirical, spatially explicit natural mortality and movement rate estimates for the threatened Gulf sturgeon (Acipenser oxyrinchus desotoi)
Merrill B. Rudd, Robert N.M. Ahrens, William E. Pine, Stephania K. Bolden , Canadian Journal of Fisheries and Aquatic Sciences , 2014RFree
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An improved method for predicting the accuracy of genetic stock identification
Eric C. Anderson, Robin S. Waples, Steven T. Kalinowski , Canadian Journal of Fisheries and Aquatic Sciences , 2008CFree
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An improved method for predicting the accuracy of genetic stock identification
Eric C. Anderson, Robin S. Waples, Steven T. Kalinowski , Transactions of the American Fisheries Society , 2008CFree
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Detecting regime shifts in fish stock dynamics
Tommi Perälä, Anna Kuparinen , Canadian Journal of Fisheries and Aquatic Sciences , 2015C++Free
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Managing mixed-stock fisheries: genotyping multi-SNP haplotypes increases power for genetic stock identification
Garrett J. McKinney, James E. Seeb, Lisa W. Seeb , Canadian Journal of Fisheries and Aquatic Sciences , 2017PythonFree
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Hard choices in assessing survival past dams a comparison of single- and paired-release strategies
Joseph Zydlewski, Daniel Stich, Douglas Sigourney , Canadian Journal of Fisheries and Aquatic Sciences , 2016RFree
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Empirical, spatially explicit natural mortality and movement rate estimates for the threatened Gulf sturgeon (Acipenser oxyrinchus desotoi)
Merrill B. Rudd, Robert N.M. Ahrens, William E. Pine, Stephania K. Bolden , Canadian Journal of Fisheries and Aquatic Sciences , 2014RFree
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Understanding inter-reach variation in brown trout (Salmo trutta) mortality rates using a hierarchical Bayesian state-space model
Victor Bret, Hervé Capra, Véronique Gouraud, Nicolas Lamouroux, Jérémy Piffady, Laurence Tissot, Etienne Rivot , Canadian Journal of Fisheries and Aquatic Sciences , 2017RFree
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Applying Bayesian spatiotemporal models to fisheries bycatch in the Canadian Arctic
Aurelie Cosandey-Godin, Elias Teixeira Krainski, Boris Worm, Joanna Mills Flemming , Canadian Journal of Fisheries and Aquatic Sciences , 2014RFree
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Conservation Risk and Uncertainty in Recovery Prospects for a Collapsed and Culturally Important Salmon Population in a Mixed-Stock Fishery
Brendan Connors, William Atlas, Christina Melymick, Megan Moody, Jason Moody, Alejandro Frid , Canadian Journal of Fisheries and Aquatic Sciences , 2019RFree
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Incorporating harvest-population diversity trade-offs into harvest policy analyses of salmon management in large river basins
Brendan M. Connors, Benjamin Staton, Lewis Coggins, Carl Walters, Mike Jones, Daniel Gwinn, Matt Catalano, Steve Fleischman , Canadian Journal of Fisheries and Aquatic Sciences , 2020RFree
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Use of the stratified-Petersen estimator in fisheries management: estimating the number of pink salmon (Oncorhynchus gorbuscha) spawners in the Fraser River
Carl James Schwarz, Carolyn Gail Taylor , Canadian Journal of Fisheries and Aquatic Sciences , 2011RFree
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Use of the stratified-Petersen estimator in fisheries management: estimating the number of pink salmon (Oncorhynchus gorbuscha) spawners in the Fraser River
Carl James Schwarz, Carolyn Gail Taylor , Canadian Journal of Fisheries and Aquatic Sciences , 2011RFree
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Genetic stock composition of marine bycatch reveals disproportional impacts on depleted river herring genetic stocks
Daniel J. Hasselman, Eric C. Anderson, Emily E. Argo, N. David Bethoney, Stephen R. Gephard, David M. Post, Bradley P. Schondelmeier, Thomas F. Schultz, Theodore V. Willis, Eric P. Palkovacs , Canadian Journal of Fisheries and Aquatic Sciences , 2015RFree
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Spatial planning for fisheries in the Northern Adriatic: working toward viable and sustainable fishing
Francois Bastardie, Silvia Angelini, Luca Bolognini, Federico Fuga, Chiara Manfredi, Michela Martinelli, J. Rasmus Nielsen, Alberto Santojanni, Giuseppe Scarcella, Fabio Grati , ICES Journal of Marine Science , 2017CFree
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Spatial planning for fisheries in the Northern Adriatic: working toward viable and sustainable fishing
Francois Bastardie, Silvia Angelini, Luca Bolognini, Federico Fuga, Chiara Manfredi, Michela Martinelli, J. Rasmus Nielsen, Alberto Santojanni, Giuseppe Scarcella, Fabio Grati , Canadian Journal of Fisheries and Aquatic Sciences , 2017CFree
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A Novel Method to Estimate Prey Contributions to Predator Diets
Pamela E. Moriarty, Timothy E. Essington, Eric J. Ward , Canadian Journal of Fisheries and Aquatic Sciences , 2016RFree
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Love the one you’re with: genomic evidence of panmixia in the sablefish (Anoplopoma fimbria)
Andrew J. Jasonowicz, Frederick W. Goetz, Giles W. Goetz, Krista M. Nichols , Canadian Journal of Fisheries and Aquatic Sciences , 2016RFree
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Assessing the recovery of an Antarctic predator from historical exploitation
Alexandre N. Zerbini, Grant Adams, John Best, Phillip J. Clapham, Jennifer A. Jackson, Andre E. Punt , Canadian Journal of Fisheries and Aquatic Sciences , 2019RFree
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PLINK: A Tool Set for Whole-Genome Association and Population-Based Linkage Analyses
Shaun Purcell, Benjamin Neale, Kathe Todd-Brown, Lori Thomas, Manuel A.R. Ferreira, David Bender, Julian Maller, Pamela Sklar, Paul I.W. de Bakker, Mark J. Daly, Pak C. Sham , Canadian Journal of Fisheries and Aquatic Sciences , 2007RFree
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Investigating the association of fish abundance and biomass with cold-water corals in the deep Northeast Atlantic Ocean using a generalized linear modelling approach
Matthias F. Biber, Gerard C.A. Duineveld, Marc S.S. Lavaleye, Andrew J. Davies, Magda J.N. Bergman, Inge M.J. van den Beld , ICES Journal of Marine Science , 2013RFree
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Investigating the association of fish abundance and biomass with cold-water corals in the deep Northeast Atlantic Ocean using a generalized linear modelling approach
Matthias F. Biber, Gerard C.A. Duineveld, Marc S.S. Lavaleye, Andrew J. Davies, Magda J.N. Bergman, Inge M.J. van den Beld , Deep-Sea Research Part I: Oceanographic Research Papers , 2013RFree
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Investigating the association of fish abundance and biomass with cold-water corals in the deep Northeast Atlantic Ocean using a generalized linear modelling approach
Matthias F. Biber, Gerard C.A. Duineveld, Marc S.S. Lavaleye, Andrew J. Davies, Magda J.N. Bergman, Inge M.J. van den Beld , Marine Ecology - Progress Series , 2013RFree
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Investigating the association of fish abundance and biomass with cold-water corals in the deep Northeast Atlantic Ocean using a generalized linear modelling approach
Matthias F. Biber, Gerard C.A. Duineveld, Marc S.S. Lavaleye, Andrew J. Davies, Magda J.N. Bergman, Inge M.J. van den Beld , Canadian Journal of Fisheries and Aquatic Sciences , 2013RFree
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Investigating the association of fish abundance and biomass with cold-water corals in the deep Northeast Atlantic Ocean using a generalized linear modelling approach
Matthias F. Biber, Gerard C.A. Duineveld, Marc S.S. Lavaleye, Andrew J. Davies, Magda J.N. Bergman, Inge M.J. van den Beld , Journal of the Marine Biological Association of the United Kingdom , 2013RFree
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A hierarchical approach to defining marine heatwaves
Alistair J. Hobday, Lisa V. Alexander, Sarah E. Perkins, Dan A. Smale, Sandra C. Straub, Eric C.J. Oliver, Jessica A. Benthuysen, Michael T. Burrows, Markus G. Donat, Ming Feng, Neil J. Holbrook, Pippa J. Moore, Hillary A. Scannell, Alex Sen Gupta, Thomas Wernberg , Progress in Oceanography , 2016PythonFree
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A hierarchical approach to defining marine heatwaves
Alistair J. Hobday, Lisa V. Alexander, Sarah E. Perkins, Dan A. Smale, Sandra C. Straub, Eric C.J. Oliver, Jessica A. Benthuysen, Michael T. Burrows, Markus G. Donat, Ming Feng, Neil J. Holbrook, Pippa J. Moore, Hillary A. Scannell, Alex Sen Gupta, Thomas Wernberg , Progress in Oceanography , 2016RFree
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A hierarchical approach to defining marine heatwaves
Alistair J. Hobday, Lisa V. Alexander, Sarah E. Perkins, Dan A. Smale, Sandra C. Straub, Eric C.J. Oliver, Jessica A. Benthuysen, Michael T. Burrows, Markus G. Donat, Ming Feng, Neil J. Holbrook, Pippa J. Moore, Hillary A. Scannell, Alex Sen Gupta, Thomas Wernberg , Frontiers in Marine Science , 2016RFree
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Random error analysis of marine xCO2 measurements in a coastal upwelling region
Janet J. Reimer, Alejandro Cueva, Gilberto Gaxiola-Castro, Ruben Lara-Lara, Rodrigo Vargas , Progress in Oceanography , 2016MatlabFree
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Methods of approximation influence aquatic ecosystem metabolism estimates
Chao Song, Walter K. Dodds, Matt T. Trentman, Janine Rüegg, Ford Ballantyne , Limnology and Oceanography , 2016RFree
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Methods of approximation influence aquatic ecosystem metabolism estimates
Chao Song, Walter K. Dodds, Matt T. Trentman, Janine Rüegg, Ford Ballantyne , Limnology , 2016RFree
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Ecosystem respiration: Drivers of daily variability and background respiration in lakes around the globe
Christopher T. Solomon, Denise A. Bruesewitz, David C. Richardson, Kevin C. Rose, Matthew C. Van de Bogert, Paul C. Hanson, Timothy K. Kratz, Bret Larget, Rita Adrian, Brenda Leroux Babin, Chih-Yu Chiu, David P. Hamilton, Evelyn E. Gaiser, Susan Hendricks, Vera Istvànovics, Alo Laas, David M. O'Donnell, Michael L. Pace, Elizabeth Ryder, Peter A. Staehr, Thomas Torgersen, Michael J. Vanni, Kathleen C. Weathers, Guangwei Zhu , Limnology and Oceanography , 2016RFree
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Ecosystem respiration: Drivers of daily variability and background respiration in lakes around the globe
Christopher T. Solomon, Denise A. Bruesewitz, David C. Richardson, Kevin C. Rose, Matthew C. Van de Bogert, Paul C. Hanson, Timothy K. Kratz, Bret Larget, Rita Adrian, Brenda Leroux Babin, Chih-Yu Chiu, David P. Hamilton, Evelyn E. Gaiser, Susan Hendricks, Vera Istvànovics, Alo Laas, David M. O'Donnell, Michael L. Pace, Elizabeth Ryder, Peter A. Staehr, Thomas Torgersen, Michael J. Vanni, Kathleen C. Weathers, Guangwei Zhu , Limnology , 2016RFree
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An optimized method for correcting fluorescence quenching using optical backscattering on autonomous platforms
Sandy J. Thomalla, William Moutier, Thomas J. Ryan-Keogh, Luke Gregor, Julia Schütt , Limnology and Oceanography , 2017PythonFree
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An optimized method for correcting fluorescence quenching using optical backscattering on autonomous platforms
Sandy J. Thomalla, William Moutier, Thomas J. Ryan-Keogh, Luke Gregor, Julia Schütt , Limnology , 2017PythonFree
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The age of water and carbon in lake-catchments: A simple dynamical model
Christopher J. Duffy, Hilary A. Dugan, Paul C. Hanson , Limnology and Oceanography , 2018RFree
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A Bayesian Method for Incorporating Self-Similarity Into Earthquake Slip Inversions
R. M. J. Amey, A. Hooper, R. J. Walters , Journal of Geophysical Research , 2018MATLABFree
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Complex Near-Surface Rheology Inferred From the Response of Greater Tokyo to Strong Ground Motions
Loïc Viens, Marine A. Denolle, Naoshi Hirata, Shigeki Nakagawa , Journal of Geophysical Research , 2018PythonFree
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VelocityConversion (Version 1.1.1)
Christian Meeßen , Journal of Geophysical Research , 2019PythonFree
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Spatio-temporal analysis and interpolation of PM10 measurements in Europe for 2009
Benedikt Graeler, Mirjam Rehr, Lydia Gerharz, Edzer Pebesma , Journal of Geophysical Research , 2013HTMLFree
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Primary and Secondary Red Bed Magnetization Constrained by Fluvial Intraclasts
Nicholas L. Swanson‐Hysell, Luke M. Fairchild, Sarah P. Slotznick , Journal of Geophysical Research , 2019Jupyter NotebookFree
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Differences between surface and column atmospheric CO2and implications for carbon cycle research
Seth C. Olsen , Journal of Geophysical Research , 2004PythonFree
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Seismic Tremor Reveals Spatial Organization and Temporal Changes of Subglacial Water System
Margot E. Vore, Timothy C. Bartholomaus, J. Paul Winberry, Jacob I. Walter, Jason M. Amundson , Journal of Geophysical Research , 2019PythonFree
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Relationship between Greenland Ice Sheet surface speed and modeled effective pressure
Laura A. Stevens, Ian J. Hewitt, Sarah B. Das, Mark D. Behn , Journal of Geophysical Research , 2018MatlabFree
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Estimating Tropical Rainforest Canopy Structure Across A Degradation Gradient In Malaysian Borneo
M. Pfeifer, L. Kor, R. Nilus, E. Turner, J. Cusack, I. Lysenko, M. Khoo, V.K. Chey, A.C. Chung, R.M. Ewers , Journal of Geophysical Research , 2016PythonFree
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Comparison of full and empirical Bayes approaches for inferring sea-level changes from tide-gauge data
Christopher G. Piecuch, Peter Huybers, Martin P. Tingley , Journal of Geophysical Research , 2017MATLABFree
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An Assessment and Improvement of Satellite Ocean Color Algorithms for the Tropical Pacific Ocean
Nicholas A. Pittman, Peter G. Strutton, Robert Johnson, Richard J. Matear , Journal of Geophysical Research , 2019PythonFree
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Vertical Fluxes of Nitrate in the Seasonal Nitracline of the Atlantic Sector of the Arctic Ocean
Achim Randelhoff, Ilker Fer, Arild Sundfjord, Jean‐Éric Tremblay, Marit Reigstad , Journal of Geophysical Research , 2016MATLABFree
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Oceanic Heat Delivery to the Antarctic Continental Shelf: Large-Scale, Low-Frequency Variability
André Palóczy, Sarah T. Gille, Julie L. McClean , Journal of Geophysical Research , 2018Jupyter NotebookFree
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Anthropogenic mining alters macroinvertebrate size spectra in streams
Justin P. F. Pomeranz, Helen J. Warburton, Jon S. Harding , Freshwater Biology , 2018RFree
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Seeking alternative stable states in a deep lake
Rosalie Bruel, Aldo Marchetto, Anaëlle Bernard, Andrea Lami, Pierre Sabatier, Victor Frossard, Marie-Elodie Perga , Freshwater Biology , 2018RFree
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Overcoming long Bayesian run times in integrated fisheries stock assessments
Cole C Monnahan, Trevor A Branch, James T Thorson, Ian J Stewart, Cody S Szuwalski , ICES Journal of Marine Science , 2019RFree
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Influence plots and metrics: tools for better understanding fisheries catch-per-unit-effort standardisations.
Nokome Bentley, Terese H. Kendrick, Paul J. Starr, Paul A. Breen , ICES Journal of Marine Science , 2011RFree
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Measuring the vertical distributional variability of pelagic fauna in Monterey Bay
Samuel S. Urmy, John K. Horne, David H. Barbee , ICES Journal of Marine Science , 2012PythonFree
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Estimating uncertainty of data limited stock assessments
Alexandros Kokkalis, Anne Maria Eikeset, Uffe H. Thygesen, Petur Steingrund, Ken H. Andersen , ICES Journal of Marine Science , 2016RFree
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Reconstructing global ex-vessel prices of fished species
Michael C. Melnychuk, Tyler Clavelle, Brandon Owashi, Kent Strauss , ICES Journal of Marine Science , 2016RFree
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Improved parameterization of the SDWBA for estimating krill target strength
Stéphane G. Conti, David A. Demer , ICES Journal of Marine Science , 2006MATLABFree
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Mixed effects: a unifying framework for statistical modelling in fisheries biology.
James T. Thorson, Cóilín Minto , ICES Journal of Marine Science , 2014RFree
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Ensemble models for data-poor assessment: accounting for uncertainty in life-history information
Merrill B Rudd, James T Thorson, Skyler R Sagarese , ICES Journal of Marine Science , 2019RFree
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Detecting mortality variation to enhance forage fish population assessments
Nis S Jacobsen, James T Thorson, Timothy E Essington , ICES Journal of Marine Science , 2018RFree
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Measuring the vertical distributional variability of pelagic fauna in Monterey Bay
Samuel S. Urmy, John K. Horne, David H. Barbee , ICES Journal of Marine Science , 2012JuliaFree
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A new approach for estimating stock status from length frequency data
Rainer Froese, Henning Winker, Gianpaolo Coro, Nazli Demirel, Athanassios C Tsikliras, Donna Dimarchopoulou, Giuseppe Scarcella, Wolfgang Nikolaus Probst, Manuel Dureuil, Daniel Pauly , ICES Journal of Marine Science , 2018RFree
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Predicting sustainable shark harvests when stock assessments are lacking
Corey J A Bradshaw, Thomas A A Prowse, Michael Drew, Bronwyn M Gillanders, Steven C Donnellan, Charlie Huveneers , ICES Journal of Marine Science , 2018RFree
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Estimating stock status from relative abundance and resilience
Rainer Froese, Henning Winker, Gianpaolo Coro, Nazli Demirel, Athanassios C Tsikliras, Donna Dimarchopoulou, Giuseppe Scarcella, Maria Lourdes Deng Palomares, Manuel Dureuil, Daniel Pauly , ICES Journal of Marine Science , 2019RFree
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Time-varying natural mortality in fisheries stock assessment models: identifying a default approach
Kelli F. Johnson, Cole C. Monnahan, Carey R. McGilliard, Katyana A. Vert-pre, Sean C. Anderson, Curry J. Cunningham, Felipe Hurtado-Ferro, Roberto R. Licandeo, Melissa L. Muradian, Kotaro Ono, Cody S. Szuwalski, Juan L. Valero, Athol R. Whitten, A. E. Punt , ICES Journal of Marine Science , 2014RFree
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Overcoming long Bayesian run times in integrated fisheries stock assessments
Cole C Monnahan, Trevor A Branch, James T Thorson, Ian J Stewart, Cody S Szuwalski , ICES Journal of Marine Science , 2019SchemeFree
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Performance of multispecies assessment models: insights on the influence of diet data
Vanessa Trijoulet, Gavin Fay, Kiersten L Curti, Brian Smith, Timothy J Miller , ICES Journal of Marine Science , 2019C++Free
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A two-stage biomass dynamic model for Bay of Biscay anchovy: a Bayesian approach
Leire Ibaibarriaga, Carmen Fernández, Andrés Uriarte, Beatriz A. Roel , ICES Journal of Marine Science , 2008RFree
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Differential adult migration-timing and stock-specific abundance of steelhead in mixed stock assemblages
Jon E. Hess, Michael W. Ackerman, Jeffrey K. Fryer, Daniel J. Hasselman, Craig A. Steele, Jeff J. Stephenson, John M. Whiteaker, Shawn R. Narum , ICES Journal of Marine Science , 2016RFree
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Bloom Phenology, Mechanisms and Future Change in the Southern Ocean
Joan Llort , ICES Journal of Marine Science , 2015FortranFree
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Automatic fish species classification in underwater videos: exploiting pre-trained deep neural network models to compensate for limited labelled data
Shoaib Ahmed Siddiqui, Ahmad Salman, Muhammad Imran Malik, Faisal Shafait, Ajmal Mian, Mark R Shortis, Euan S Harvey , ICES Journal of Marine Science , 2017PythonFree
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Overcoming long Bayesian run times in integrated fisheries stock assessments
Cole C Monnahan, Trevor A Branch, James T Thorson, Ian J Stewart, Cody S Szuwalski , ICES Journal of Marine Science , 2019RFree
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How catch underreporting can bias stock assessment of and advice for northwest Atlantic mackerel and a possible resolution using censored catch
Elisabeth Van Beveren, Daniel Duplisea, Martin Castonguay, Thomas Doniol-Valcroze, Stéphane Plourde, Noel Cadigan , ICES Journal of Marine Science , 2017RFree
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Development and application of an agent-based model to evaluate methods for estimating relative abundance indices for shoaling fish such as Pacific rockfish (Sebastes spp.)
James T. Thorson, Ian J. Stewart, André E. Punt , ICES Journal of Marine Science , 2012RFree
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Connecting single-stock assessment models through correlated survival
Christoffer Moesgaard Albertsen, Anders Nielsen, Uffe Høgsbro Thygesen , ICES Journal of Marine Science , 2017RFree
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Automatic fish detection in underwater videos by a deep neural network-based hybrid motion learning system
Ahmad Salman, Shoaib Ahmad Siddiqui, Faisal Shafait, Ajmal Mian, Mark R Shortis, Khawar Khurshid, Adrian Ulges, Ulrich Schwanecke , ICES Journal of Marine Science , 2019PythonFree
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Parsing human and biophysical drivers of coral reef regimes
Jean-Baptiste Jouffray, Lisa M. Wedding, Albert V. Norström, Mary K. Donovan, Gareth J. Williams, Larry B. Crowder, Ashley L. Erickson, Alan M. Friedlander, Nicholas A. J. Graham, Jamison M. Gove, Carrie V. Kappel, John N. Kittinger, Joey Lecky, Kirsten L. L. Oleson, Kimberly A. Selkoe, Crow White, Ivor D. Williams, Magnus Nyström , Coral Reefs , 2019HTMLFree
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Seabirds fuel coral reef productivity and functioning in the absence of invasive rats
Nicholas A. J. Graham, Shaun K. Wilson, Peter Carr, Andrew S. Hoey, Simon Jennings, M. Aaron MacNeil , Coral Reefs , 2018Jupyter NotebookFree
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Fishing degrades size structure of coral reef fish communities
James P. W. Robinson, Ivor D. Williams, Andrew M. Edwards, Jana McPherson, Lauren Yeager, Laurent Vigliola, Russell E. Brainard, Julia K. Baum , Coral Reefs , 2016RFree
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Individual and Population Benefits of Marine Reserves for Reef Sharks
Ross G. Dwyer, Nils C. Krueck, Vinay Udyawer, Michelle R. Heupel, Demian Chapman, Harold L. Pratt, Ricardo Garla, Colin A. Simpfendorfer , Coral Reefs , 2020RFree
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Productive instability of coral reef fisheries after climate-driven regime shifts
James P. W. Robinson, Shaun K. Wilson, Jan Robinson, Calvin Gerry, Juliette Lucas, Cindy Assan, Rodney Govinden, Simon Jennings, Nicholas A. J. Graham , Coral Reefs , 2018RFree
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Data for McDevitt-Irwin et al. Variable interaction outcomes of local disturbance and El Niño-induced heat stress on coral microbiome alpha and beta diversity
Jamie M. McDevitt-Irwin, Melissa Garren, Ryan McMinds, Rebecca Vega Thurber, Julia K. Baum , Coral Reefs , 2019RFree
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