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Genetic stock composition of marine bycatch reveals disproportional impacts on depleted river herring genetic stocks
Daniel J. Hasselman, Eric C. Anderson, Emily E. Argo, N. David Bethoney, Stephen R. Gephard, David M. Post, Bradley P. Schondelmeier, Thomas F. Schultz, Theodore V. Willis, Eric P. Palkovacs , Canadian Journal of Fisheries and Aquatic Sciences , 2015RFree
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Genetic and Manual Survey Methods Yield Different and Complementary Views of an Ecosystem
Ryan P. Kelly, Collin J. Closek, James L. O'Donnell, James E. Kralj, Andrew O. Shelton, Jameal F. Samhouri , Frontiers in Marine Science , 2017RFree
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FUNGuild: An open annotation tool for parsing fungal community datasets by ecological guild
Nhu H. Nguyen, Zewei Song, Scott T. Bates, Sara Branco, Leho Tedersoo, Jon Menke, Jonathan S. Schilling, Peter G. Kennedy , Deep-Sea Research Part I: Oceanographic Research Papers , 2015PythonFree
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Foraging ecology of tropicbirds breeding in two contrasting marine environments in the tropical Atlantic
N Diop, L Zango, A Beard, CT Ba, PI Ndiaye, L Henry, E Clingham, S Oppel, J González-Solís , Marine Ecology - Progress Series , 2018RFree
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Fishing degrades size structure of coral reef fish communities
James P. W. Robinson, Ivor D. Williams, Andrew M. Edwards, Jana McPherson, Lauren Yeager, Laurent Vigliola, Russell E. Brainard, Julia K. Baum , Coral Reefs , 2016RFree
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Extreme weather events modulate processing and export of dissolved organic carbon in the Neuse River Estuary, NC
Alexandria G. Hounshell, Jacob C. Rudolph, Bryce R. Van Dam, Nathan S. Hall, Christopher L. Osburn, Hans W. Paerl , Estuarine, Coastal and Shelf Science , 2019MATLABFree
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Estimation of predator-prey mass ratios using stable isotopes: sources of errors
E Hertz, JPW Robinson, M Trudel, A Mazumder, JK Baum , Marine Ecology , 2014RFree
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Estimation of predator-prey mass ratios using stable isotopes: sources of errors
E Hertz, JPW Robinson, M Trudel, A Mazumder, JK Baum , Marine Ecology - Progress Series , 2014RFree
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Estimating uncertainty of data limited stock assessments
Alexandros Kokkalis, Anne Maria Eikeset, Uffe H. Thygesen, Petur Steingrund, Ken H. Andersen , ICES Journal of Marine Science , 2016RFree
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Estimating Tropical Rainforest Canopy Structure Across A Degradation Gradient In Malaysian Borneo
M. Pfeifer, L. Kor, R. Nilus, E. Turner, J. Cusack, I. Lysenko, M. Khoo, V.K. Chey, A.C. Chung, R.M. Ewers , Journal of Geophysical Research , 2016PythonFree
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Estimating stock status from relative abundance and resilience
Rainer Froese, Henning Winker, Gianpaolo Coro, Nazli Demirel, Athanassios C Tsikliras, Donna Dimarchopoulou, Giuseppe Scarcella, Maria Lourdes Deng Palomares, Manuel Dureuil, Daniel Pauly , ICES Journal of Marine Science , 2019RFree
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Estimating habitat volume of living resources using three-dimensional circulation and biogeochemical models
Katharine A. Smith, Zachary Schlag, Elizabeth W. North , Marine Ecology - Progress Series , 2018FortranFree
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Environmental conditions and herbivore biomass determine coral reef benthic community composition: implications for quantitative baselines
James P. W. Robinson, Ivor D. Williams, Lauren A. Yeager, Jana M. McPherson, Jeanette Clark, Thomas A. Oliver, Julia K. Baum , Coral Reefs , 2018RFree
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Ensemble models for data-poor assessment: accounting for uncertainty in life-history information
Merrill B Rudd, James T Thorson, Skyler R Sagarese , ICES Journal of Marine Science , 2019RFree
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Empirical, spatially explicit natural mortality and movement rate estimates for the threatened Gulf sturgeon (Acipenser oxyrinchus desotoi)
Merrill B. Rudd, Robert N.M. Ahrens, William E. Pine, Stephania K. Bolden , Canadian Journal of Fisheries and Aquatic Sciences , 2014RFree
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Empirical, spatially explicit natural mortality and movement rate estimates for the threatened Gulf sturgeon (Acipenser oxyrinchus desotoi)
Merrill B. Rudd, Robert N.M. Ahrens, William E. Pine, Stephania K. Bolden , Canadian Journal of Fisheries and Aquatic Sciences , 2014RFree
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Effects of interannual en- vironmental variability on the transport-retention dynamics in haddock Melanogrammus aeglefinus larvae on Georges Bank
JM Boucher, C Chen, Y Sun, RC Beardsley , Marine Ecology - Progress Series , 2013FortranFree
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Ecosystem respiration: Drivers of daily variability and background respiration in lakes around the globe
Christopher T. Solomon, Denise A. Bruesewitz, David C. Richardson, Kevin C. Rose, Matthew C. Van de Bogert, Paul C. Hanson, Timothy K. Kratz, Bret Larget, Rita Adrian, Brenda Leroux Babin, Chih-Yu Chiu, David P. Hamilton, Evelyn E. Gaiser, Susan Hendricks, Vera Istvànovics, Alo Laas, David M. O'Donnell, Michael L. Pace, Elizabeth Ryder, Peter A. Staehr, Thomas Torgersen, Michael J. Vanni, Kathleen C. Weathers, Guangwei Zhu , Limnology , 2016RFree
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Ecosystem respiration: Drivers of daily variability and background respiration in lakes around the globe
Christopher T. Solomon, Denise A. Bruesewitz, David C. Richardson, Kevin C. Rose, Matthew C. Van de Bogert, Paul C. Hanson, Timothy K. Kratz, Bret Larget, Rita Adrian, Brenda Leroux Babin, Chih-Yu Chiu, David P. Hamilton, Evelyn E. Gaiser, Susan Hendricks, Vera Istvànovics, Alo Laas, David M. O'Donnell, Michael L. Pace, Elizabeth Ryder, Peter A. Staehr, Thomas Torgersen, Michael J. Vanni, Kathleen C. Weathers, Guangwei Zhu , Limnology and Oceanography , 2016RFree
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Drainage enhancement effects on a waterlogged Rhode Island (USA) salt marsh
Kenneth B. Raposa, Robin L. Weber, Wenley Ferguson, Jeffrey Hollister, Ron Rozsa, Nicole Maher, Alan Gettman , Estuarine, Coastal and Shelf Science , 2019RFree
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Differential lipid dynamics in stocked and wild juvenile lake trout
Madelyn G. Sorrentino, Taylor R. Stewart, J. Ellen Marsden, Jason D. Stockwell , Journal of Great Lakes Research , 2019RFree
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Differential adult migration-timing and stock-specific abundance of steelhead in mixed stock assemblages
Jon E. Hess, Michael W. Ackerman, Jeffrey K. Fryer, Daniel J. Hasselman, Craig A. Steele, Jeff J. Stephenson, John M. Whiteaker, Shawn R. Narum , ICES Journal of Marine Science , 2016RFree
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Differences between surface and column atmospheric CO2and implications for carbon cycle research
Seth C. Olsen , Journal of Geophysical Research , 2004PythonFree
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Development and application of an agent-based model to evaluate methods for estimating relative abundance indices for shoaling fish such as Pacific rockfish (Sebastes spp.)
James T. Thorson, Ian J. Stewart, André E. Punt , ICES Journal of Marine Science , 2012RFree
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Determination of fish movement patterns from tag recoveries using maximum likelihood estimators
Ray Hilborn , Canadian Journal of Fisheries and Aquatic Sciences , 2008RFree
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Detection of a new non-native freshwater species by DNA metabarcoding of environmental samples
Rosetta C. Blackman, Drew Constable, Christoph Hahn, Andrew M. Sheard, Jessica Durkota, Bernd Hänfling, Lori Lawson Handley , Aquatic Invasions , 2017UnrealScriptFree
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Detecting regime shifts in fish stock dynamics
Tommi Perälä, Anna Kuparinen , Canadian Journal of Fisheries and Aquatic Sciences , 2015C++Free
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Detecting mortality variation to enhance forage fish population assessments
Nis S Jacobsen, James T Thorson, Timothy E Essington , ICES Journal of Marine Science , 2018RFree
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Data for McDevitt-Irwin et al. Variable interaction outcomes of local disturbance and El Niño-induced heat stress on coral microbiome alpha and beta diversity
Jamie M. McDevitt-Irwin, Melissa Garren, Ryan McMinds, Rebecca Vega Thurber, Julia K. Baum , Coral Reefs , 2019RFree
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Cradles and museums of Antartic teleost biodiversity
Alex Dornburg, Sarah Federman, April D. Lamb, Christopher D. Jones, Thomas J. Near , Fisheries Science , 2017RFree
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Conservation Risk and Uncertainty in Recovery Prospects for a Collapsed and Culturally Important Salmon Population in a Mixed-Stock Fishery
Brendan Connors, William Atlas, Christina Melymick, Megan Moody, Jason Moody, Alejandro Frid , Canadian Journal of Fisheries and Aquatic Sciences , 2019RFree
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Connecting single-stock assessment models through correlated survival
Christoffer Moesgaard Albertsen, Anders Nielsen, Uffe Høgsbro Thygesen , ICES Journal of Marine Science , 2017RFree
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Complex Near-Surface Rheology Inferred From the Response of Greater Tokyo to Strong Ground Motions
Loïc Viens, Marine A. Denolle, Naoshi Hirata, Shigeki Nakagawa , Journal of Geophysical Research , 2018PythonFree
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Comparison of full and empirical Bayes approaches for inferring sea-level changes from tide-gauge data
Christopher G. Piecuch, Peter Huybers, Martin P. Tingley , Journal of Geophysical Research , 2017MATLABFree
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Combining ALOS/PALSAR derived vegetation structure and inundation patterns to characterize major vegetation types in the Mamirauá Sustainable Development Reserve, Central Amazon floodplain, Brazil
Wolfgang J. Junk, Maria Teresa Fernandez Piedade, Jochen Schöngart, Florian Wittmann , Wetlands Ecology and Management , 2012RFree
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Bloom Phenology, Mechanisms and Future Change in the Southern Ocean
Joan Llort , ICES Journal of Marine Science , 2015FortranFree
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Black swans in space: modelling spatiotemporal processes with extremes
Sean C. Anderson, Eric J. Ward , Canadian Journal of Fisheries and Aquatic Sciences , 2018C++Free
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Behavioural switching in a central place forager: patterns of diving behaviour in the macaroni penguin (Eudyptes chrysolophus)
Tom Hart, Richard Mann, Tim Coulson, Nathalie Pettorelli, Phil Trathan , Marine Biology , 2010MatlabFree
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Automatic fish species classification in underwater videos: exploiting pre-trained deep neural network models to compensate for limited labelled data
Shoaib Ahmed Siddiqui, Ahmad Salman, Muhammad Imran Malik, Faisal Shafait, Ajmal Mian, Mark R Shortis, Euan S Harvey , ICES Journal of Marine Science , 2017PythonFree
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Automatic fish detection in underwater videos by a deep neural network-based hybrid motion learning system
Ahmad Salman, Shoaib Ahmad Siddiqui, Faisal Shafait, Ajmal Mian, Mark R Shortis, Khawar Khurshid, Adrian Ulges, Ulrich Schwanecke , ICES Journal of Marine Science , 2019PythonFree
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Associations among fish length, dam passage history, and survival to adulthood in two at-risk species of Pacific salmon
James R. Faulkner, Blane L. Bellerud, Daniel L. Widener, Richard W. Zabel , Transactions of the American Fisheries Society , 2019RFree
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Assessing the recovery of an Antarctic predator from historical exploitation
Alexandre N. Zerbini, Grant Adams, John Best, Phillip J. Clapham, Jennifer A. Jackson, Andre E. Punt , Canadian Journal of Fisheries and Aquatic Sciences , 2019RFree
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Applying Bayesian spatiotemporal models to fisheries bycatch in the Canadian Arctic
Aurelie Cosandey-Godin, Elias Teixeira Krainski, Boris Worm, Joanna Mills Flemming , Canadian Journal of Fisheries and Aquatic Sciences , 2014RFree
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Anthropogenic mining alters macroinvertebrate size spectra in streams
Justin P. F. Pomeranz, Helen J. Warburton, Jon S. Harding , Freshwater Biology , 2018RFree
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An optimized method for correcting fluorescence quenching using optical backscattering on autonomous platforms
Sandy J. Thomalla, William Moutier, Thomas J. Ryan-Keogh, Luke Gregor, Julia Schütt , Limnology , 2017PythonFree
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An optimized method for correcting fluorescence quenching using optical backscattering on autonomous platforms
Sandy J. Thomalla, William Moutier, Thomas J. Ryan-Keogh, Luke Gregor, Julia Schütt , Limnology and Oceanography , 2017PythonFree
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An improved method for predicting the accuracy of genetic stock identification
Eric C. Anderson, Robin S. Waples, Steven T. Kalinowski , Canadian Journal of Fisheries and Aquatic Sciences , 2008CFree
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An improved method for predicting the accuracy of genetic stock identification
Eric C. Anderson, Robin S. Waples, Steven T. Kalinowski , Transactions of the American Fisheries Society , 2008CFree
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An improved calibration method for the drift of the conductivity sensor on autonomous CTD profiling floats by θ-S climatology
W. Brechner Owens, Annie P.S. Wong , Deep-Sea Research Part I: Oceanographic Research Papers , 2008MATLABFree
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An Evaluation of the Age Estimation Technique for Paddlefish Stock
Lauren Blenn , Reviews in Fish Biology and Fisheries , 2013HTMLFree
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An Evaluation of the Age Estimation Technique for Paddlefish Stock
Lauren Blenn , Transactions of the American Fisheries Society , 2013HTMLFree
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An Assessment and Improvement of Satellite Ocean Color Algorithms for the Tropical Pacific Ocean
Nicholas A. Pittman, Peter G. Strutton, Robert Johnson, Richard J. Matear , Journal of Geophysical Research , 2019PythonFree
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Albatrosses redirect flight towards vessels at the limit of their visual range
J Collet, SC Patrick, H Weimerskirch , Marine Ecology - Progress Series , 2015RFree
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Accounting for variable recruitment and fishing mortality in length-based stock assessments for data-limited fisheries
Merrill B. Rudd, James T. Thorson , Canadian Journal of Fisheries and Aquatic Sciences , 2017RFree
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Accounting for variable recruitment and fishing mortality in length-based stock assessments for data-limited fisheries
Merrill B. Rudd, James T. Thorson , Canadian Journal of Fisheries and Aquatic Sciences , 2017RFree
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Accounting for the bin structure of data removes bias when fitting size spectra
AM Edwards, JPW Robinson, JL Blanchard, JK Baum, MJ Plank , Marine Ecology - Progress Series , 2020RFree
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A two-stage biomass dynamic model for Bay of Biscay anchovy: a Bayesian approach
Leire Ibaibarriaga, Carmen Fernández, Andrés Uriarte, Beatriz A. Roel , ICES Journal of Marine Science , 2008RFree
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A Shear-Limited Flocculation Model for Dynamically Predicting Average Floc Size
R. Kuprenas, Duc Tran, Kyle Strom , Estuarine, Coastal and Shelf Science , 2018Jupyter NotebookFree
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A Novel Method to Estimate Prey Contributions to Predator Diets
Pamela E. Moriarty, Timothy E. Essington, Eric J. Ward , Canadian Journal of Fisheries and Aquatic Sciences , 2016RFree
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A new model to assess the probability of occurrence of a species, based on presence-only data
G Beaugrand, S Lenoir, F Ibañez, C Manté , Marine Ecology , 2010RFree
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A new model to assess the probability of occurrence of a species, based on presence-only data
G Beaugrand, S Lenoir, F Ibañez, C Manté , Marine Ecology - Progress Series , 2010RFree
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A new approach for estimating stock status from length frequency data
Rainer Froese, Henning Winker, Gianpaolo Coro, Nazli Demirel, Athanassios C Tsikliras, Donna Dimarchopoulou, Giuseppe Scarcella, Wolfgang Nikolaus Probst, Manuel Dureuil, Daniel Pauly , ICES Journal of Marine Science , 2018RFree
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A multi-year hierarchical Bayesian mark-recapture model using recurring salmonid behavior to account for sparse or missing data
Bryce N. Oldemeyer, Timothy Copeland, Brian P. Kennedy , Canadian Journal of Fisheries and Aquatic Sciences , 2018RFree
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A Modelling Synthesis of the Volume Flux through Cook Strait
Mark G. Haffield, Craig L. Stevens , New Zealand Journal of Marine and Freshwater Research , 2020ShellFree
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A method for computing volumetric fish density using stereo cameras
Kresimir Williams, Christopher N. Rooper, Alex De Robertis, Mike Levine, Rick Towler , Journal of Experimental Marine Biology and Ecology , 2018RFree
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A hierarchical approach to defining marine heatwaves
Alistair J. Hobday, Lisa V. Alexander, Sarah E. Perkins, Dan A. Smale, Sandra C. Straub, Eric C.J. Oliver, Jessica A. Benthuysen, Michael T. Burrows, Markus G. Donat, Ming Feng, Neil J. Holbrook, Pippa J. Moore, Hillary A. Scannell, Alex Sen Gupta, Thomas Wernberg , Progress in Oceanography , 2016RFree
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A hierarchical approach to defining marine heatwaves
Alistair J. Hobday, Lisa V. Alexander, Sarah E. Perkins, Dan A. Smale, Sandra C. Straub, Eric C.J. Oliver, Jessica A. Benthuysen, Michael T. Burrows, Markus G. Donat, Ming Feng, Neil J. Holbrook, Pippa J. Moore, Hillary A. Scannell, Alex Sen Gupta, Thomas Wernberg , Frontiers in Marine Science , 2016RFree
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A hierarchical approach to defining marine heatwaves
Alistair J. Hobday, Lisa V. Alexander, Sarah E. Perkins, Dan A. Smale, Sandra C. Straub, Eric C.J. Oliver, Jessica A. Benthuysen, Michael T. Burrows, Markus G. Donat, Ming Feng, Neil J. Holbrook, Pippa J. Moore, Hillary A. Scannell, Alex Sen Gupta, Thomas Wernberg , Progress in Oceanography , 2016PythonFree
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A genomic assessment of movement and gene flow around the South Florida vicariance zone in the migratory coastal blacknose shark, Carcharhinus acronotus
Miguel Baltazar-Soares, Arne Biastoch, Chris Harrod, Reinhold Hanel, Lasse Marohn, Enno Prigge, Derek Evans, Kenneth Bodles, Erik Behrens, Claus W. Böning, Christophe Eizaguirre , Marine Genomics , 2014RFree
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A Bayesian Method for Incorporating Self-Similarity Into Earthquake Slip Inversions
R. M. J. Amey, A. Hooper, R. J. Walters , Journal of Geophysical Research , 2018MATLABFree
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