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Science NestCategoriesEvolution
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  • Recursive anisotropy: a spatial taphonomic study of the Early Pleistocene vertebrate assemblage of Tsiotra Vryssi, Mygdonia Basin, Greece

    Recursive anisotropy: a spatial taphonomic study of the Early Pleistocene vertebrate assemblage of Tsiotra Vryssi, Mygdonia Basin, Greece , Boreas ,  2019
    R

    Free

  • Phylogenetic structure of geographical co-occurrence among New World Triatominae species, vectors of Chagas disease

    Soledad Ceccarelli, Silvia A. Justi, Jorge E. Rabinovich, José Alexandre F. Diniz Filho, Fabricio Villalobos , Journal of Biogeography ,  2020
    R

    Free

  • Validating dispersal distances inferred from autoregressive occupancy models with genetic parentage assignments

    Laurie A. Hall, Nathan D. Van Schmidt, Steven R. Beissinger , Oikos ,  2018
    R

    Free

  • Suite of simple metrics reveals common movement syndromes across vertebrate taxa

    Briana Abrahms, Dana P. Seidel, Eric Dougherty, Elliott L. Hazen, Steven J. Bograd, Alan M. Wilson, J. Weldon McNutt, Daniel P. Costa, Stephen Blake, Justin S. Brashares & Wayne M. Getz , Movement Ecology ,  2017
    R

    Free

  • Examining the evidence for decoupling between photosynthesis and transpiration during heat extremes

    Martin G. De Kauwe, Martin G. De Kauwe, Andrew J. Pitman, John E. Drake, Anna Ukkola, Anne Griebel, Elise Pendall, Suzanne Prober, Michael Roderick , Biogeosciences ,  2019
    Python

    Free

  • Abundance and Distribution of Transposable Elements in Two Drosophila QTL Mapping Resources

    Julie M. Cridland, Stuart J. Macdonald, Anthony D. Long, Kevin R. Thornton , Genome Biology and Evolution ,  2013
    C++

    Free

  • Trade-Offs and Coexistence: A Lottery Model Applied to Fig Wasp Communities

    A. Bradley Duthie, Karen C. Abbott and John D. Nason , American Naturalist ,  2014
    C

    Free

  • Warming increases the cost of growth in a model vertebrate

    Diego R. Barneche, Miki Jahn, Frank Seebacher , Functional Ecology ,  2019
    R

    Free

  • A theoretical framework for analyzing coupled neuronal networks: Application to the olfactory system

    Andrea K. Barreiro, Shree Hari Gautam, Woodrow L. Shew, Cheng Ly , PLoS Computational Biology ,  2017
    Matlab

    Free

  • Top-down inputs drive neuronal network rewiring and context-enhanced sensory processing in olfaction

    Wayne Adams , James N. Graham , Xuchen Han , Hermann Riecke , PLoS Computational Biology ,  2019
    MATLAB

    Free

  • Communication through Resonance in Spiking Neuronal Networks

    Gerald Hahn , Alejandro F. Bujan , Yves Frégnac, Ad Aertsen, Arvind Kumar , PLoS Computational Biology ,  2014
    Python

    Free

  • Emergence of Functional Specificity in Balanced Networks with Synaptic Plasticity

    Sadra Sadeh , Claudia Clopath , Stefan Rotter , PLoS Computational Biology ,  2015
    Python

    Free

  • Neuronal Spike Timing Adaptation Described with a Fractional Leaky Integrate-and-Fire Model

    Wondimu Teka, Toma M. Marinov, Fidel Santamaria , PLoS Computational Biology ,  2014
    MATLAB

    Free

  • Deep convolutional models improve predictions of macaque V1 responses to natural images

    Santiago A. Cadena , George H. Denfield, Edgar Y. Walker, Leon A. Gatys, Andreas S. Tolias , Matthias Bethge , Alexander S. Ecker , PLoS Computational Biology ,  2019
    Python

    Free

  • Untangling the proximate causes and underlying drivers of deforestation and forest degradation in Myanmar

    Cheng Ling Lim, Graham W. Prescott, Jose Don T. De Alban, Alan D. Ziegler, Edward L. Webb , Conservation Biology ,  2017
    QML

    Free

  • Detecting host–parasitoid interactions in an invasive Lepidopteran using nested tagging DNA metabarcoding

    James J. N. Kitson, Christoph Hahn, Richard J. Sands, Nigel A. Straw, Darren M. Evans, David H. Lunt , Molecular Ecology ,  2018
    HTML

    Free

  • Water availability drives signatures of local adaptation in whitebark pine (Pinus albicaulis Engelm.) across fine spatial scales of the Lake Tahoe Basin, USA

    Brandon M. Lind, Christopher J. Friedline, Jill L. Wegrzyn, Patricia E. Maloney, Detlev R. Vogler, David B. Neale, Andrew J. Eckert , Molecular Ecology ,  2017
    Jupyter Notebook

    Free

  • babette: BEAUti 2, BEAST2 and Tracer for R

    Richèl J. C. Bilderbeek, Rampal S. Etienne , Methods in Ecology and Evolution ,  2018
    R

    Free

  • Incorporating fine-scale environmental heterogeneity into broad-extent models

    Laura J. Graham, Rebecca Spake, Simon Gillings, Kevin Watts, Felix Eigenbrod , Methods in Ecology and Evolution ,  2019
    R

    Free

  • Towards an ecological trait-data standard

    Florian D. Schneider, David Fichtmueller, Martin M. Gossner, Anton Güntsch, Malte Jochum, Birgitta König-Ries, Gaëtane Le Provost, Peter Manning, Andreas Ostrowski , Methods in Ecology and Evolution ,  2019
    R

    Free

  • Estimating Diversification Rates on Incompletely Sampled Phylogenies: Theoretical Concerns and Practical Solutions

    Jonathan Chang, Daniel L Rabosky, Michael E Alfaro , Methods in Ecology and Evolution ,  2019
    Python

    Free

  • Fast evaluation of study designs for spatially explicit capture–recapture

    Murray G. Efford, John Boulanger , Methods in Ecology and Evolution ,  2019
    R

    Free

  • pavo2: New tools for the spectral and spatial analysis of colour in r

    Rafael Maia, Hugo Gruson, John A. Endler, Thomas E. White , Methods in Ecology and Evolution ,  2019
    R

    Free

  • Estimating species richness and accumulation by modelling species occurrence and detectability.

    Robert M. Dorazio, J. Andrew Royle, Bo Söderström, Anders Glimskär , Methods in Ecology and Evolution ,  2016
    Python

    Free

  • Active learning for classifying long-duration audio recordings of the environment

    Mahnoosh Kholghi, Yvonne Phillips, Michael Towsey, Laurianne Sitbon, Paul Roe , Methods in Ecology and Evolution ,  2018
    Java

    Free

  • Non-specific amplification compromises environmental DNA metabarcoding with COI

    Rupert A. Collins, Judith Bakker, Owen S. Wangensteen, Ana Z. Soto, Laura Corrigan, David W. Sims, Martin J. Genner, Stefano Mariani , Methods in Ecology and Evolution ,  2019
    R

    Free

  • Using machine vision to estimate fish length from images using regional convolutional neural networks

    Graham G. Monkman, Kieran Hyder, Michel J. Kaiser, Franck P. Vidal , Methods in Ecology and Evolution ,  2019
    Python

    Free

  • raptr: Representative and adequate prioritization toolkit in R

    Jeffrey O. Hanson, Jonathan R. Rhodes, Hugh P. Possingham, Richard A. Fuller , Methods in Ecology and Evolution ,  2017
    R

    Free

  • A convolutional neural network for detecting sea turtles in drone imagery

    Patrick C. Gray, Abram B. Fleishman, David J. Klein, Matthew W. McKown, Vanessa S. Bézy, Kenneth J. Lohmann, David W. Johnston , Methods in Ecology and Evolution ,  2018
    Python

    Free

  • dispRity: A modular R package for measuring disparity

    Thomas Guillerme , Methods in Ecology and Evolution ,  2019
    HTML

    Free

  • GRAPHITE: A graphical environment for scalable in situ video tracking of moving insects

    Blair J. Rossetti, Travis Dynes, Berry Brosi, Jacobus C. de Roode, Jun Kong , Methods in Ecology and Evolution ,  2017
    Matlab

    Free

  • Local snow melt and temperature—but not regional sea ice—explain variation in spring phenology in coastal Arctic tundra

    Jakob J. Assmann, Isla H. Myers-Smith, Albert B. Phillimore, Anne D. Bjorkman, Richard E. Ennos, Janet S. Prevéy, Greg H. R. Henry, Niels M. Schmidt, Robert D. Hollister , Ecological Monographs ,  2019
    R

    Free

  • Root microbiota assembly and adaptive differentiation among European Arabidopsis populations

    Thorsten Thiergart, Paloma Durán, Thomas Ellis, Nathan Vannier, Ruben Garrido-Oter, Eric Kemen , Nature Ecology and Evolution ,  2019
    R

    Free

  • Escaping the evolutionary trap? Sex chromosome turnover in basilisks and related lizards (Corytophanidae: Squamata)

    Stuart V. Nielsen , Irán Andira Guzmán-Méndez , Tony Gamble , Madison Blumer , Brendan J. Pinto , Lukáš Kratochvíl, Michail Rovatsos , Molecular Biology and Evolution ,  2019
    Python

    Free

  • Size-based ecological interactions drive food web responses to climate warming

    Max Lindmark, Jan Ohlberger, Magnus Huss, Anna Gårdmark , Ecology Letters ,  2019
    R

    Free

  • Metabloic compensation constrains the temperature dependence of gross primary production

    Daniel Padfield, Chris Lowe, Angus Buckling, Richard Ffrench-Constant , Ecology Letters ,  2017
    R

    Free

  • Abunance of common species, not species richness, drives delivery of a real-world ecosystem service

    Rachael Winfree, Jeremy W. Fox, Neal M. Williams, James R. Reilly, Daniel P.Cariveau , Ecology Letters ,  2015
    R

    Free

  • Do baseline glucocorticoids presict fitness? Trends in Ecology and Evolution

    Frances Bonier, Paul R. Martin, Ignacio T. Moore, John C. Wingfield , Trends in Ecology and Evolution ,  2009
    HTML

    Free

  • On Fitting the Poisson Lognormal Distribution to Species-Abundance Data

    M.G. Bulmer , Annual Review of Ecology, Evolution, and Systematics ,  1974
    Pascal

    Free

  • Evolution of Dosage Compensation in Anolis Carolinensis, a Reptile with XX.XY Chromosomal Sex Determination

    Shawn M.Rupp, Timothy H. Webster, Kimberly C.Olney, Elizabeth D.Hutchins, Kenro Kusumi, Melissa A. Wilson Sayres , Genome Biology ,  2016
    Python

    Free

  • An optimized library for reference-based deconvolution of whole-blood biospecimens assayed using the Illumina HumanMethylationEPIC BedArray

    Lucas A. Salas, Devin C. Koestler, Rondi A. Butler, Helen M.Hansen, John K. Wiencke, Karl T. Kelsey, Brock C. Christensen , Genome Biology ,  2018
    R

    Free

  • Estimating recruitment from capture–recapture data by modelling spatio-temporal variation in birth and age-specific survival rates

    Richard B. Chandler, Kristin Engebretsen, Michael J. Cherry, Elina P. Garrison, Karl V. Miller , Methods in Ecology and Evolution ,  2018
    R

    Free

  • Environmental drivers of variability in the movement ecology of turkey vultures (Cathartes aura) in North and South America

    Somayeh Dodge , Gil Bohrer , Keith Bildstein , Sarah C. Davidson , Rolf Weinzierl , Marc J. Bechard , David Barber , Roland Kays , David Brandes , Jiawei Han and Martin Wikelski , Methods in Ecology and Evolution ,  2014
    R

    Free

  • An r package and online resource for macroevolutionary studies using the ray-finned fish tree of life

    Jonathan Chang, Daniel L. Rabosky, Stephen A. Smith, Michael E. Alfaro , Methods in Ecology and Evolution ,  2019
    R

    Free

  • Using taxonomic consistency with semi-automated data pre-processing for high quality DNA barcodes

    Björn Rulik, Jonas Eberle, Laura von der Mark, Jana Thormann, Manfred Jung, Frank Köhler, Wolfgang Apfel, Andreas Weigel, Andreas Kopetz, Jonas Köhler, Frank Fritzlar , Methods in Ecology and Evolution ,  2017
    R

    Free

  • Fast evaluation of study designs for spatially explicit capture–recapture

    Murray G. Efford, John Boulanger , Methods in Ecology and Evolution ,  2019
    R

    Free

  • Towards an ecological trait-data standard

    Florian D. Schneider, David Fichtmueller, Martin M. Gossner, Anton Güntsch, Malte Jochum, Birgitta König-Ries, Gaëtane Le Provost, Peter Manning, Andreas Ostrowski , Methods in Ecology and Evolution ,  2019
    R

    Free

  • Assessing adequacy of models of phyletic evolution in the fossil record

    Kjetil Lysne Voje , Methods in Ecology and Evolution ,  2018
    R

    Free

  • DYNAMITE: a phylogenetic tool for identification of dynamic transmission epicenters

    Brittany Rife Magalis, Simone Marini, Marco Salemi, Mattia Prosperi , Methods in Ecology and Evolution ,  2021
    R

    Free

  • Water availability drives signatures of local adaptation in whitebark pine (Pinus albicaulis Engelm.) across fine spatial scales of the Lake Tahoe Basin, USA

    Brandon M. Lind, Christopher J. Friedline, Jill L. Wegrzyn, Patricia E. Maloney, Detlev R. Vogler, David B. Neale, Andrew J. Eckert , Molecular Ecology ,  2017
    Jupyter Notebook

    Free

  • Determination of genetic relatedness from low-coverage human genome sequences using pedigree simulations

    Michael D. Martin, Flora Jay, Sergi Castellano, Montgomery Slatkin , Molecular Ecology ,  2017
    Python

    Free

  • Why are metapopulations so rare?

    Emanuel A. Fronhofer, Alexander Kubisch, Frank M. Hilker, Thomas Hovestadt, Hans Joachim Poethke , Conservation Biology ,  2012
    Pascal

    Free

  • Deep convolutional models improve predictions of macaque V1 responses to natural images

    Santiago A. Cadena , George H. Denfield, Edgar Y. Walker, Leon A. Gatys, Andreas S. Tolias , Matthias Bethge , Alexander S. Ecker , PLoS Computational Biology ,  2019
    Python

    Free

  • Drones and convolutional neural networks facilitate automated and accurate cetacean species identification and photogrammetry

    Patrick C. Gray, Kevin C. Bierlich, Sydney A. Mantell, Ari S. Friedlaender, Jeremy A. Goldbogen, David W. Johnston , Methods in Ecology and Evolution ,  2019
    Jupyter Notebook

    Free

  • Rapid spatial risk modelling for management of early weed invasions: Balancing ecological complexity and operational needs

    Jens G. Froese, Alan R. Pearse, Grant Hamilton , Methods in Ecology and Evolution ,  2019
    R

    Free

  • Using machine vision to estimate fish length from images using regional convolutional neural networks

    Graham G. Monkman, Kieran Hyder, Michel J. Kaiser, Franck P. Vidal , Methods in Ecology and Evolution ,  2019
    Python

    Free

  • Non-specific amplification compromises environmental DNA metabarcoding with COI

    Rupert A. Collins, Judith Bakker, Owen S. Wangensteen, Ana Z. Soto, Laura Corrigan, David W. Sims, Martin J. Genner, Stefano Mariani , Methods in Ecology and Evolution ,  2019
    R

    Free

  • Dealing with high uncertainty in qualitative network models using Boolean analysis

    Nadiah P. Kristensen, Ryan A. Chisholm, Eve McDonald-Madden , Methods in Ecology and Evolution ,  2019
    R

    Free

  • STDP Allows Fast Rate-Modulated Coding with Poisson-Like Spike Trains

    Matthieu Gilson , Timothée Masquelier , Etienne Hugues , PLoS Computational Biology ,  2011
    Python

    Free

  • Improving North American terrestrial CO2 flux diagnosis using spatial structure in land surface model residuals

    T. W. Hilton, K. J. Davis, N. M. Urban , Biogeosciences ,  2013
    R

    Free

  • Global biosphere–climate interaction: a causal appraisal of observations and models over multiple temporal scales

    Jeroen Claessen, Annalisa Molini, Brecht Martens, Matteo Detto, Matthias Demuzere,Diego G. Miralles. , Biogeosciences ,  2019
    MATLAB

    Free

  • A current affair: entanglement of humpback whales in coastal shark-control nets

    Jessica A. Bolin, David S. Schoeman, Carme Pizà-Roca, Kylie L. Scales , Remote Sensing in Ecology and Conservation ,  2019
    R

    Free

  • Machine learning to classify animal species in camera trap images: Applications in ecology

    Michael A. Tabak, Mohammad S. Norouzzadeh, David W. Wolfson, Steven J. Sweeney, Kurt C. Vercauteren, Nathan P. Snow, Joseph M. Halseth, Paul A. Di Salvo , Methods in Ecology and Evolution ,  2018
    R

    Free

  • Functional ecology and imperfect detection of species

    Tobias Roth, Eric Allan, Peter B. Pearman, Valentin Amrhein , Methods in Ecology and Evolution ,  2017
    R

    Free

  • embarcadero: Species distribution modelling with Bayesian additive regression trees in r

    Colin J. Carlson , Methods in Ecology and Evolution ,  2020
    R

    Free

  • Models of Neocortical Layer 5b Pyramidal Cells Capturing a Wide Range of Dendritic and Perisomatic Active Properties

    Etay Hay , Sean Hill, Felix Schürmann, Henry Markram, Idan Segev , PLoS Computational Biology ,  2011
    AGS Script

    Free

  • Synaptic Plasticity Can Produce and Enhance Direction Selectivity

    Sean Carver , Eatai Roth, Noah J Cowan, Eric S Fortune , PLoS Computational Biology ,  2008
    MATLAB

    Free

  • Red List assessments of East African chameleons: a case study of why we need experts

    Angelique Hjarding, Krystal A. Tolley, Neil D. Burgess , Oryx ,  2014
    PHP

    Free

  • A shared coevolutionary history does not alter the outcome of coalescence in experimental populations of Pseudomonas fluorescens

    Meaghan Castledine, Angus Buckling, Daniel Padfield , Evolutionary Biology ,  2018
    R

    Free

  • Estimating contributions of pelagic and benthic pathways to consumer production in coupled marine food webs

    Jessica I. Duffill Telsnig, Simon Jennings, Aileen C. Mill, Nicola D. Walker, Andrew C. Parnell, Nicholas V. C. Polunin , Food Webs ,  2018
    R

    Free

  • Holocene vegetation and fire dynamics at Crveni Potok, a small mire in the Dinaric Alps (Tara National Park, Serbia)

    Walter Finsinger, Ceser Morales-Molino, Mariusz Galka, Verushka Valsecchi, Srdjan Bojovic, Willy Tinner , Review of Palaeobotany and Palynology ,  2017
    R

    Free

  • A Galaxy-based bioinformatics pipeline for optimised, streamlined microsatellite development from Illumina next-generation sequencing data

    Sarah M. Griffiths, Graeme Fox, Peter J. Briggs, Ian J. Donaldson, Simon Hood, Pen Richardson, George W. Leaver, Nathan K. Truelove & Richard F. Preziosi , Conservation Genetics ,  2016
    Python

    Free

  • HomBlocks: A multiple-alignment construction pipeline for organelle phylogenomics based on locally collinear block searching

    Guiqi Bi, Yunxiang Mao, Qikun Xing, Min Cao , Frontiers in Ecology and Evolution ,  2018
    Python

    Free

  • Does Urbanization Affect Predation of Bird Nests? A Meta-Analysis

    Ernõ Vincze, Gábor Seress, Malgorzata Lagisz, Shinichi Nakagawa, Niels J. Dingemanse, Philipp Sprau , Frontiers in Ecology and Evolution ,  2017
    R

    Free

  • A Trait-Based Model for Describing the Adaptive Dynamics of Coral-Algae Symbiosis

    N. Alexia Raharinirina, Gunnar Brandt, Agostino Merico , Frontiers in Ecology and Evolution ,  2017
    Python

    Free

  • Automatic methods for long-term tracking and the detection and decoding of communication dances in honeybees

    Fernando Wario, Benjamin Wild, Margaret J. Couvillon Raúa Rojas, Tim Landgraf , Frontiers in Ecology and Evolution ,  2015
    C++

    Free

  • 2matrix: A utility for indel coding and phylogenetic matrix concatenation

    Nelson R. Salinas, Damon P. Little , International Journal of Plant Sciences ,  2014
    Perl

    Free

  • Robustness of the approximate likelihood of the protracted speciation model

    C. Simonet, R. Scherrer, A. Rego-Costa, R. S. Etienne , Journal of Evolutionary Biology ,  2017
    Roff

    Free

  • Resilience to multiple stressors in an aquatic plant and its microbiome

    Anna M. O'Brien, Zhu Hao Yu, Dian-ya Luo, Jason Laurich, Elodie Passeport, Megan E. Frederickson , American Journal of Botany ,  2019
    R

    Free

  • Cyanobacterial harmful algal blooms are a biological disturbance to Western Lake Erie bacterial communities

    Michelle A. Berry, Timothy W. Davis, Rose M. Cory, Melissa B. Duhaime, Thomas H. Johengen, George W. Kling, John A. Marino, Paul A. Den Uyl, Duane Gossiaux, Gregory J. Dick, Vincent J. Denef , Microbial Ecology ,  2016
    HTML

    Free

  • Phylogenetic Affiliation of SSU rRNA Genes Generated by Massively Parallel Sequencing: New Insights into the Freshwater Protist Diversity

    Najwa Taib, Jean-François Mangot, Isabelle Domaizon, Gisèle Bronner, Didier Debroas , Archaea ,  2013
    Perl

    Free

  • Genomics and taxonomy in diagnostics for food security: soft-rotting enterobacterial plant pathogens

    Leighton Pritchard, Rachel H. Glover, Sonia Humphris, John G. Elphinstone and Ian K. Toth , Archaea ,  2015
    Makefile

    Free

  • Natural and anthropogenic drivers of Bornean elephant movement strategies

    Luke J. Evans, Benoit Goossens, Andrew B. Davies, Glen Reynolds, Gregory P. Asner , Global Ecology and Conservation ,  2020
    R

    Free

  • A practical method to account for variation in detection range in acoustic telemetry arrays to accurately quantify the spatial ecology of aquatic animals

    Jacob W. Brownscombe, Lucas P. Griffin, Jacqueline M. Chapman, Danielle Morley, Alejandro Acosta, Glenn T. Crossin, Sara J. Iverson, Aaron J. Adams, Steven J. Cooke, Andy J. Danylchuk , Ecology and Evolution ,  2019
    R

    Free

  • Trophodynamics of Southern Ocean pteropods on the southern Kerguelen Plateau

    Christine K. Weldrick, Rowan Trebilco, Diana M. Davies, Kerrie M. Swadling , Ecology and Evolution ,  2019
    R

    Free

  • Can time-to-detection models with fewer survey replicates provide a robust alternative to traditional site-occupancy models?

    Dominic A. W. Henry, Alan T. K. Lee, Res Altwegg , Ecology and Evolution ,  2020
    R

    Free

  • Unraveling spatiotemporal variability of arbuscular mycorrhizal fungi in a temperate grassland plot

    Kezia Goldmann, Runa S. Boeddinghaus, Sandra Klemmer, Kathleen M. Regan, Anna Heintz-Buschart, Markus Fischer, Daniel Prati, Hans-Peter Piepho, Doreen Berner, Sven Marhan , Mycorrhiza ,  2019
    HTML

    Free

  • The evolution of self-control

    Evan L. MacLean, Brian Hare, Charles L. Nunn, Elsa Addessi, Federica Amici, Rindy C. Anderson , Animal Cognition ,  2014
    HTML

    Free

  • Diversity and evolution of the transposable element repertoire in insects

    Malte Petersen, David Armisén, Richard A. Gibbs, Lars Hering, Abderrahman Khila, Georg Mayer, Stephen Richards, Oliver Niehuis & Bernhard Misof , BMC Evolutionary Biology ,  2019
    Perl

    Free

  • Early modern human lithic technology from Jerimalai, East Timor

    Ben Marwick,Chris Clarkson,Sue O'Connor, Sophie Collins , Journal of Human Evolution ,  2016
    HTML

    Free

  • A Humboldtian approach to life and climate of the geological past: Estimating palaeotemperature from dental traits of mammalian communities

    Otto Oksanen, Indrė Žliobaitė, Juha Saarinen, A. Michelle Lawing, Mikael Fortelius , Journal of Biogeography ,  2019
    R

    Free

  • Predicting vegetation type through physiological and environmental interactions with leaf traits: evergreen and deciduous forests in an earth system modeling framework

    Ensheng Weng, Caroline E. Farrior, Ray Dybzinski, Stephen W. Pacala , Biogeosciences ,  2016
    Fortran

    Free

  • STDP Allows Fast Rate-Modulated Coding with Poisson-Like Spike Trains

    Matthieu Gilson , Timothée Masquelier , Etienne Hugues , PLoS Computational Biology ,  2011
    Python

    Free

  • Odorant mixtures elicit less variable and faster responses than pure odorants

    Ho Ka Chan , Fabian Hersperger, Emiliano Marachlian, Brian H. Smith, Fernando Locatelli, Paul Szyszka, Thomas Nowotny , PLoS Computational Biology ,  2018
    C++

    Free

  • Dynamic Mechanisms of Neocortical Focal Seizure Onset

    Yujiang Wang, Marc Goodfellow, Peter Neal Taylor, Gerold Baier , PLoS Computational Biology ,  2014
    MATLAB

    Free

  • A Learning Theory for Reward-Modulated Spike-Timing-Dependent Plasticity with Application to Biofeedback

    Robert Legenstein , Dejan Pecevski , Wolfgang Maass , PLoS Computational Biology ,  2008
    Python

    Free

  • Decision-support tools for dynamic management

    Heather Welch, Stephanie Brodie, Michael G. Jacox, Steven J. Bograd, Elliott L. Hazen , Conservation Biology ,  2019
    R

    Free

  • The effect of filtration method on the efficiency of environmental DNA capture and quantification via metabarcoding

    Jianlong Li, Lori-Jayne Lawson Handley, Daniel S. Read, Bernd Hänfling , Molecular Ecology ,  2018
    R

    Free

  • Reliable species distributions are obtainable with sparse, patchy and biased data by leveraging over species and data types

    Samantha L. Peel, Nicole A. Hill, Scott D. Foster, Simon J. Wotherspoon, Claudio Ghiglione, Stefano Schiaparelli , Methods in Ecology and Evolution ,  2019
    R

    Free

  • Estimating dispersal kernels using genetic parentage data

    Michael Bode, David H. Williamson, Hugo B. Harrison, Nick Outram, Geoffrey P. Jones , Methods in Ecology and Evolution ,  2017
    Matlab

    Free

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