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Science NestCategoriesEvolution
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Title Title
Date Date
  • Influence of food hoarding behavior on the over-winter survival of pikas in strongly seasonal environments

    Shawn F. Morrison, Graeme Pelchat, Aaron Donahue & David S. Hik , Oecologia ,  2008
    R

    Free

  • UMA NOTA SOBRE OS LIMITES TERRITORIAIS DA MATA ATLÂNTICA

    Renata Lara Muylaert, Maurício Humberto Vancine, Rodrigo Bernardo, Júlia Emi Faria Oshima, Thadeu Sobral-Souza, Vinicius Rodrigues Tonetti1, Bernardo Brandão Niebuhr & Milton Cezar Ribeiro , Oecologia ,  2018
    R

    Free

  • Mechanistic model predicts tissue–environment relationships and trophic shifts in animal hydrogen and oxygen isotope ratios

    Sarah Magozzi, Hannah B. Vander Zanden, Michael B. Wunder & Gabriel J. Bowen , Oecologia ,  2019
    R

    Free

  • Recursive anisotropy: a spatial taphonomic study of the Early Pleistocene vertebrate assemblage of Tsiotra Vryssi, Mygdonia Basin, Greece

    Recursive anisotropy: a spatial taphonomic study of the Early Pleistocene vertebrate assemblage of Tsiotra Vryssi, Mygdonia Basin, Greece , Boreas ,  2019
    R

    Free

  • Algorithmic approaches to aid species' delimitation in multidimensional morphospace

    Thomas HG Ezard, Paul N Pearson & Andy Purvis , BMC Evolutionary Biology ,  2020
    R

    Free

  • Diversity and evolution of the transposable element repertoire in insects

    Malte Petersen, David Armisén, Richard A. Gibbs, Lars Hering, Abderrahman Khila, Georg Mayer, Stephen Richards, Oliver Niehuis & Bernhard Misof , BMC Evolutionary Biology ,  2019
    Perl

    Free

  • Early modern human lithic technology from Jerimalai, East Timor

    Ben Marwick,Chris Clarkson,Sue O'Connor, Sophie Collins , Journal of Human Evolution ,  2016
    HTML

    Free

  • A current affair: entanglement of humpback whales in coastal shark-control nets

    Jessica A. Bolin, David S. Schoeman, Carme Pizà-Roca, Kylie L. Scales , Remote Sensing in Ecology and Conservation ,  2019
    R

    Free

  • Contributions toward understanding the biodiversity of Passiflora in North America: Updates and a new combination from the Baja California Peninsula, Mexico and vicinity

    Harlan T. Svoboda, AJ Harris , Journal of Systematics and Evolution ,  2018
    R

    Free

  • Testing species assemblage predictions from stacked and joint species distribution models

    Damaris Zurell, Niklaus E. Zimmermann, Helge Gross, Andri Baltensweiler, Thomas Sattler, Rafael O. Wüest , Journal of Biogeography ,  2019
    R

    Free

  • A Humboldtian approach to life and climate of the geological past: Estimating palaeotemperature from dental traits of mammalian communities

    Otto Oksanen, Indrė Žliobaitė, Juha Saarinen, A. Michelle Lawing, Mikael Fortelius , Journal of Biogeography ,  2019
    R

    Free

  • Phylogenetic structure of geographical co-occurrence among New World Triatominae species, vectors of Chagas disease

    Soledad Ceccarelli, Silvia A. Justi, Jorge E. Rabinovich, José Alexandre F. Diniz Filho, Fabricio Villalobos , Journal of Biogeography ,  2020
    R

    Free

  • A world of sequences: can we use georeferenced nucleotide databases for a robust automated phylogeography?

    Paolo Gratton, Silvio Marta, Gaëlle Bocksberger, Marten Winter, Emiliano Trucchi, Hjalmar Kühl , Journal of Biogeography ,  2016
    R

    Free

  • Validating dispersal distances inferred from autoregressive occupancy models with genetic parentage assignments

    Laurie A. Hall, Nathan D. Van Schmidt, Steven R. Beissinger , Oikos ,  2018
    R

    Free

  • Picky hitch-hikers: vector choice leads to directed dispersal and fat-tailed kernels in a passively dispersing mite

    Emanuel A. Fronhofer, Ellen B. Sperr, Anna Kreis, Manfred Ayasse, Hans Joachim Poethke, Marco Tschapka , Oikos ,  2013
    Pascal

    Free

  • Are variations of direct and indirect plant interactions along a climatic gradient dependent on species’ strategies? An experiment on tree seedlings

    Emmanuel Defossez, Benoît Courbaud, Olivier Lasbouygues, Katja Schiffers, Georges Kunstler , Oikos ,  2015
    R

    Free

  • Individual-based modelling of resource competition to predict density-dependent population dynamics: a case study with white storks

    Damaris Zurell, Ute Eggers, Michael Kaatz, Shay Rotics, Nir Sapir, Martin Wikelski, Ran Nathan, Florian Jeltsch , Oikos ,  2014
    C++

    Free

  • Suite of simple metrics reveals common movement syndromes across vertebrate taxa

    Briana Abrahms, Dana P. Seidel, Eric Dougherty, Elliott L. Hazen, Steven J. Bograd, Alan M. Wilson, J. Weldon McNutt, Daniel P. Costa, Stephen Blake, Justin S. Brashares & Wayne M. Getz , Movement Ecology ,  2017
    R

    Free

  • A novel method for assessing climate change impacts in ecotron experiments

    Inne Vanderkelen, Jakob Zscheischler, Lukas Gudmundsson, Klaus Keuler, Francois Rineau, Natalie Beenaerts, Jaco Vangronsveld, Sara Vicca & Wim Thiery , Biogeosciences ,  2020
    MATLAB

    Free

  • Examining the evidence for decoupling between photosynthesis and transpiration during heat extremes

    Martin G. De Kauwe, Martin G. De Kauwe, Andrew J. Pitman, John E. Drake, Anna Ukkola, Anne Griebel, Elise Pendall, Suzanne Prober, Michael Roderick , Biogeosciences ,  2019
    Python

    Free

  • Global biosphere–climate interaction: a causal appraisal of observations and models over multiple temporal scales

    Jeroen Claessen, Annalisa Molini, Brecht Martens, Matteo Detto, Matthias Demuzere,Diego G. Miralles. , Biogeosciences ,  2019
    MATLAB

    Free

  • Improving North American terrestrial CO2 flux diagnosis using spatial structure in land surface model residuals

    T. W. Hilton, K. J. Davis, N. M. Urban , Biogeosciences ,  2013
    R

    Free

  • Predicting vegetation type through physiological and environmental interactions with leaf traits: evergreen and deciduous forests in an earth system modeling framework

    Ensheng Weng, Caroline E. Farrior, Ray Dybzinski, Stephen W. Pacala , Biogeosciences ,  2016
    Fortran

    Free

  • Kinetics and Identities of Extracellular Peptidases in Subsurface Sediments of the White Oak River Estuary, North Carolina

    Andrew D. Steen, Richard T. Kevorkian, Jordan T. Bird, Nina Dombrowski et al , Environmental Microbiology ,  2019
    R

    Free

  • Abundance and Distribution of Transposable Elements in Two Drosophila QTL Mapping Resources

    Julie M. Cridland, Stuart J. Macdonald, Anthony D. Long, Kevin R. Thornton , Genome Biology and Evolution ,  2013
    C++

    Free

  • Mapping of Multiple Complementary Sex Determination Loci in a Parasitoid Wasp

    Cyril Matthey-Doret, Casper J van der Kooi, Daniel L Jeffries, Jens Bast, Alice B Dennis, Christoph Vorburger, Tanja Schwander , Genome Biology and Evolution ,  2019
    Shell

    Free

  • Evolution of Dosage Compensation in Anolis carolinensis, a Reptile with XX/XY Chromosomal Sex Determination

    Shawn M. Rupp, Timothy H. Webster, Kimberly C. Olney, Elizabeth D. Hutchins, Kenro Kusumi, Melissa A. Wilson Sayres , Genome Biology and Evolution ,  2016
    Python

    Free

  • Predicting to new environments: tools for visualising model behaviour and impacts on mapped distributions

    Damaris Zurell, Jane Elith, Boris Schröder , Diversity and Distributions ,  2012
    R

    Free

  • Trade-Offs and Coexistence: A Lottery Model Applied to Fig Wasp Communities

    A. Bradley Duthie, Karen C. Abbott and John D. Nason , American Naturalist ,  2014
    C

    Free

  • Warming increases the cost of growth in a model vertebrate

    Diego R. Barneche, Miki Jahn, Frank Seebacher , Functional Ecology ,  2019
    R

    Free

  • Habitat and fishing control grazing potential on coral reefs

    James P. W. Robinson, Jamie M. McDevitt-Irwin, Jan-Claas Dajka, Jeneen Hadj-Hammou, Samantha Howlett, Alexia Graba-Landry, Andrew S. Hoey, Kirsty L. Nash , Functional Ecology ,  2019
    R

    Free

  • Among-strain consistency in the pace and shape of senescence in duckweed

    Patrick M. Barks, Zach W. Dempsey, Theresa M. Burg, Robert A. Laird , Journal of Ecology ,  2018
    R

    Free

  • Fire history and plant community composition outweigh decadal multi-factor global change as drivers of microbial composition in an annual grassland

    Clara Qin, Kai Zhu, Nona R. Chiariello, Christopher B. Field, Kabir G. Peay , Journal of Ecology ,  2019
    R

    Free

  • Network inference reveals novel connections in pathways regulating growth and defense in the yeast salt response

    Matthew E. MacGilvray , Evgenia Shishkova , Deborah Chasman, Michael Place, Anthony Gitter, Joshua J. Coon, Audrey P. Gasch , PLoS Computational Biology ,  2018
    GAMS

    Free

  • A theoretical framework for analyzing coupled neuronal networks: Application to the olfactory system

    Andrea K. Barreiro, Shree Hari Gautam, Woodrow L. Shew, Cheng Ly , PLoS Computational Biology ,  2017
    Matlab

    Free

  • Prefrontal Cortical Mechanisms Underlying Individual Differences in Cognitive Flexibility and Stability

    Diana J. N. Armbruster, Kai Ueltzhöffer, Ulrike Basten, Christian J. Fiebach , PLoS Computational Biology ,  2012
    Scilab

    Free

  • External Drive to Inhibitory Cells Induces Alternating Episodes of High- and Low-Amplitude Oscillations

    Oscar J. Avella Gonzalez, Karlijn I. van Aerde, Ronald A. J. van Elburg, Simon-Shlomo Poil, Huibert D. Mansvelder, Klaus Linkenkaer-Hansen, Jaap van Pelt, Arjen van Ooyen , PLoS Computational Biology ,  2012
    MATLAB

    Free

  • Spike and burst coding in thalamocortical relay cells.

    Fleur Zeldenrust , Pascal Chameau, Wytse J. Wadman , PLoS Computational Biology ,  2018
    AMPL

    Free

  • STDP Allows Fast Rate-Modulated Coding with Poisson-Like Spike Trains

    Matthieu Gilson , Timothée Masquelier , Etienne Hugues , PLoS Computational Biology ,  2011
    Python

    Free

  • A Voltage-Based STDP Rule Combined with Fast BCM-Like Metaplasticity Accounts for LTP and Concurrent “Heterosynaptic” LTD in the Dentate Gyrus In Vivo

    Peter Jedlicka , Lubica Benuskova , Wickliffe C. Abraham , PLoS Computational Biology ,  2015
    AMPL

    Free

  • Top-down inputs drive neuronal network rewiring and context-enhanced sensory processing in olfaction

    Wayne Adams , James N. Graham , Xuchen Han , Hermann Riecke , PLoS Computational Biology ,  2019
    MATLAB

    Free

  • Dendritic Nonlinearities Reduce Network Size Requirements and Mediate ON and OFF States of Persistent Activity in a PFC Microcircuit Model

    Athanasia Papoutsi, Kyriaki Sidiropoulou, Panayiota Poirazi , PLoS Computational Biology ,  2014
    AMPL

    Free

  • Communication through Resonance in Spiking Neuronal Networks

    Gerald Hahn , Alejandro F. Bujan , Yves Frégnac, Ad Aertsen, Arvind Kumar , PLoS Computational Biology ,  2014
    Python

    Free

  • Odorant mixtures elicit less variable and faster responses than pure odorants

    Ho Ka Chan , Fabian Hersperger, Emiliano Marachlian, Brian H. Smith, Fernando Locatelli, Paul Szyszka, Thomas Nowotny , PLoS Computational Biology ,  2018
    C++

    Free

  • Experimentally-constrained biophysical models of tonic and burst firing modes in thalamocortical neurons

    Elisabetta Iavarone , Jane Yi, Ying Shi, Bas-Jan Zandt, Christian O’Reilly, Werner Van Geit, Christian Rössert, Henry Markram, Sean L. Hill , PLoS Computational Biology ,  2019
    AGS Script

    Free

  • Cerebellar Nuclear Neurons Use Time and Rate Coding to Transmit Purkinje Neuron Pauses

    Shyam Kumar Sudhakar, Benjamin Torben-Nielsen, Erik De Schutter , PLoS Computational Biology ,  2015
    AMPL

    Free

  • Dynamic Mechanisms of Neocortical Focal Seizure Onset

    Yujiang Wang, Marc Goodfellow, Peter Neal Taylor, Gerold Baier , PLoS Computational Biology ,  2014
    MATLAB

    Free

  • Contribution of synchronized GABAergic neurons to dopaminergic neuron firing and bursting

    Ekaterina O. Morozova, Maxym Myroshnychenko, Denis Zakharov , PLoS Computational Biology ,  2016
    C++

    Free

  • Computational Models Describing Possible Mechanisms for Generation of Excessive Beta Oscillations in Parkinson’s Disease

    Alex Pavlides, S. John Hogan, Rafal Bogacz , PLoS Computational Biology ,  2015
    MATLAB

    Free

  • Models of Neocortical Layer 5b Pyramidal Cells Capturing a Wide Range of Dendritic and Perisomatic Active Properties

    Etay Hay , Sean Hill, Felix Schürmann, Henry Markram, Idan Segev , PLoS Computational Biology ,  2011
    AGS Script

    Free

  • Synaptic Plasticity Can Produce and Enhance Direction Selectivity

    Sean Carver , Eatai Roth, Noah J Cowan, Eric S Fortune , PLoS Computational Biology ,  2008
    MATLAB

    Free

  • A Learning Theory for Reward-Modulated Spike-Timing-Dependent Plasticity with Application to Biofeedback

    Robert Legenstein , Dejan Pecevski , Wolfgang Maass , PLoS Computational Biology ,  2008
    Python

    Free

  • Emergence of spontaneous assembly activity in developing neural networks without afferent input

    Marcus A. Triplett, Lilach Avitan, Geoffrey J. Goodhill , PLoS Computational Biology ,  2018
    Matlab

    Free

  • Emergence of Functional Specificity in Balanced Networks with Synaptic Plasticity

    Sadra Sadeh , Claudia Clopath , Stefan Rotter , PLoS Computational Biology ,  2015
    Python

    Free

  • Power-Law Dynamics of Membrane Conductances Increase Spiking Diversity in a Hodgkin-Huxley Model

    Wondimu Teka, David Stockton, Fidel Santamaria , PLoS Computational Biology ,  2016
    MATLAB

    Free

  • Function and energy consumption constrain neuronal biophysics in a canonical computation: Coincidence detection

    Michiel W. H. Remme , John Rinzel, Susanne Schreiber , PLoS Computational Biology ,  2018
    MATLAB

    Free

  • A Sparse Coding Model with Synaptically Local Plasticity and Spiking Neurons Can Account for the Diverse Shapes of V1 Simple Cell Receptive Fields

    Joel Zylberberg , Jason Timothy Murphy, Michael Robert DeWeese , PLoS Computational Biology ,  2011
    Python

    Free

  • Neuronal Spike Timing Adaptation Described with a Fractional Leaky Integrate-and-Fire Model

    Wondimu Teka, Toma M. Marinov, Fidel Santamaria , PLoS Computational Biology ,  2014
    MATLAB

    Free

  • Deterministic response strategies in trial-and-error learning

    Holger Mohr, Katharina Zwosta, Dimitrije Markovic, Sebastian Bitzer, Uta Wolfensteller, Hannes Ruge , PLoS Computational Biology ,  2018
    MATLAB

    Free

  • Gap junction plasticity as a mechanism to regulate network-wide oscillations

    Guillaume Pernelle, Wilten Nicola, Claudia Clopath , PLoS Computational Biology ,  2018
    HTML

    Free

  • Fast Reconstruction of Compact Context-Specific Metabolic Network Models

    Nikos Vlassis , Maria Pires Pacheco , Thomas Sauter , PLoS Computational Biology ,  2014
    Python

    Free

  • JTK_CYCLE: An Efficient Nonparametric Algorithm for Detecting Rhythmic Components in Genome-Scale Data Sets

    Michael E. Hughes, John B. Hogenesch, Karl Kornacker , PLoS Computational Biology ,  2010
    Python

    Free

  • Seizure pathways: A model-based investigation

    Philippa J. Karoly , Levin Kuhlmann, Daniel Soudry, David B. Grayden, Mark J. Cook, Dean R. Freestone , PLoS Computational Biology ,  2018
    MATLAB

    Free

  • Deep convolutional models improve predictions of macaque V1 responses to natural images

    Santiago A. Cadena , George H. Denfield, Edgar Y. Walker, Leon A. Gatys, Andreas S. Tolias , Matthias Bethge , Alexander S. Ecker , PLoS Computational Biology ,  2019
    Python

    Free

  • Why are metapopulations so rare?

    Emanuel A. Fronhofer, Alexander Kubisch, Frank M. Hilker, Thomas Hovestadt, Hans Joachim Poethke , Conservation Biology ,  2012
    Pascal

    Free

  • Untangling the proximate causes and underlying drivers of deforestation and forest degradation in Myanmar

    Cheng Ling Lim, Graham W. Prescott, Jose Don T. De Alban, Alan D. Ziegler, Edward L. Webb , Conservation Biology ,  2017
    QML

    Free

  • Decision-support tools for dynamic management

    Heather Welch, Stephanie Brodie, Michael G. Jacox, Steven J. Bograd, Elliott L. Hazen , Conservation Biology ,  2019
    R

    Free

  • Determination of genetic relatedness from low-coverage human genome sequences using pedigree simulations

    Michael D. Martin, Flora Jay, Sergi Castellano, Montgomery Slatkin , Molecular Ecology ,  2017
    Python

    Free

  • Allelic diversity for neutral markers retains a higher adaptive potential for quantitative traits than expected heterozygosity

    Ana Vilas, Andrés Pérez-Figueroa, Humberto Quesada, Armando Caballero , Molecular Ecology ,  2015
    Shell

    Free

  • The effect of filtration method on the efficiency of environmental DNA capture and quantification via metabarcoding

    Jianlong Li, Lori-Jayne Lawson Handley, Daniel S. Read, Bernd Hänfling , Molecular Ecology ,  2018
    R

    Free

  • Detecting host–parasitoid interactions in an invasive Lepidopteran using nested tagging DNA metabarcoding

    James J. N. Kitson, Christoph Hahn, Richard J. Sands, Nigel A. Straw, Darren M. Evans, David H. Lunt , Molecular Ecology ,  2018
    HTML

    Free

  • Comparative genomics in the Asteraceae reveals little evidence for parallel evolutionary change in invasive taxa

    Kathryn A. Hodgins, Dan G. Bock, Min A. Hahn, Sylvia M. Heredia, Kathryn G. Turner, Loren H. Rieseberg , Molecular Ecology ,  2014
    R

    Free

  • Water availability drives signatures of local adaptation in whitebark pine (Pinus albicaulis Engelm.) across fine spatial scales of the Lake Tahoe Basin, USA

    Brandon M. Lind, Christopher J. Friedline, Jill L. Wegrzyn, Patricia E. Maloney, Detlev R. Vogler, David B. Neale, Andrew J. Eckert , Molecular Ecology ,  2017
    Jupyter Notebook

    Free

  • Particle-association lifestyle is a phylogenetically conserved trait in bathypelagic prokaryotes

    Guillem Salazar, Francisco M. Cornejo-Castillo, Encarna Borrull, Cristina Díez-Vives, Elena Lara, Dolors Vaqué, Jesús M. Arrieta, Carlos M. Duarte, Josep M. Gasol, Silvia G. Acinas , Molecular Ecology ,  2015
    R

    Free

  • RAD genotyping reveals fine-scale genetic structuring and provides powerful population assignment in a widely distributed marine species, the American lobster (Homarus americanus)

    Laura Benestan, Thierry Gosselin, Charles Perrier, Bernard Sainte-Marie, Rémy Rochette, Louis Bernatchez , Molecular Ecology ,  2015
    HTML

    Free

  • Environmental DNA metabarcoding of lake fish communities reflects long-term data from established survey methods

    Bernd Hänfling, Lori Lawson Handley, Daniel S. Read, Christoph Hahn, Jianlong Li, Paul Nichols, Rosetta C. Blackman, Anna Oliver, Ian J. Winfield , Molecular Ecology ,  2016
    R

    Free

  • Local temperature and ecological similarity drive distributional dynamics of tropical mammals worldwide

    Lydia Beaudrot, Miguel A. Acevedo, Jean-Philippe Lessard, Alex Zvoleff, Patrick A. Jansen, Douglas Sheil, Francesco Rovero, Timothy O’Brien, Eileen Larney, Christine Fletcher, Sandy Andelman, Jorge Ahumada , Global Ecology and Biogeography ,  2019
    R

    Free

  • The case of an arctic wild ass highlights the utility of ancient DNA for validating problematic identifications in museum collections

    Alisa O. Vershinina, Joshua D. Kapp, Gennady F. Baryshnikov, Beth Shapiro , Molecular Ecology Resources ,  2019
    Shell

    Free

  • DYNAMITE: a phylogenetic tool for identification of dynamic transmission epicenters

    Brittany Rife Magalis, Simone Marini, Marco Salemi, Mattia Prosperi , Methods in Ecology and Evolution ,  2021
    R

    Free

  • The r package divDyn for quantifying diversity dynamics using fossil sampling data

    Ádám T. Kocsis, Carl J. Reddin, John Alroy, Wolfgang Kiessling , Methods in Ecology and Evolution ,  2019
    R

    Free

  • Improving the accessibility and transferability of machine learning algorithms for identification of animals in camera trap images: MLWIC2

    Michael A. Tabak, Mohammad S. Norouzzadeh, David W. Wolfson, Erica J. Newton, Raoul K. Boughton, Jacob S. Ivan, Eric A. Odell, Eric S. Newkirk, Reesa Y. Conrey, Jennifer Stenglein , Methods in Ecology and Evolution ,  2020
    R

    Free

  • performance: An R Package for Assessment, Comparison and Testing of Statistical Models

    Daniel Lüdecke, Mattan S. Ben-Shachar, Indrajeet Patil, Philip Waggoner, and Dominique Makowski , Methods in Ecology and Evolution ,  2021
    R

    Free

  • Assessing adequacy of models of phyletic evolution in the fossil record

    Kjetil Lysne Voje , Methods in Ecology and Evolution ,  2018
    R

    Free

  • Automatic generation of evolutionary hypotheses using mixed Gaussian phylogenetic models

    Venelin Mitov, Krzysztof Bartoszek, and Tanja Stadler , Methods in Ecology and Evolution ,  2019
    R

    Free

  • Reliable species distributions are obtainable with sparse, patchy and biased data by leveraging over species and data types

    Samantha L. Peel, Nicole A. Hill, Scott D. Foster, Simon J. Wotherspoon, Claudio Ghiglione, Stefano Schiaparelli , Methods in Ecology and Evolution ,  2019
    R

    Free

  • babette: BEAUti 2, BEAST2 and Tracer for R

    Richèl J. C. Bilderbeek, Rampal S. Etienne , Methods in Ecology and Evolution ,  2018
    R

    Free

  • Incorporating fine-scale environmental heterogeneity into broad-extent models

    Laura J. Graham, Rebecca Spake, Simon Gillings, Kevin Watts, Felix Eigenbrod , Methods in Ecology and Evolution ,  2019
    R

    Free

  • The multiple population genetic and demographic routes to islands of genomic divergence

    Claudio S. Quilodrán, Kristen Ruegg, Ashley T. Sendell-Price, Eric C. Anderson, Tim Coulson, Sonya M. Clegg , Methods in Ecology and Evolution ,  2019
    R

    Free

  • Estimating dispersal kernels using genetic parentage data

    Michael Bode, David H. Williamson, Hugo B. Harrison, Nick Outram, Geoffrey P. Jones , Methods in Ecology and Evolution ,  2017
    Matlab

    Free

  • Filling reference gaps via assembling DNA barcodes using high-throughput sequencing—moving toward barcoding the world

    Shanlin Liu, Chentao Yang, Chengran Zhou, Xin Zhou , Methods in Ecology and Evolution ,  2017
    Python

    Free

  • Parallel Likelihood Calculation for Phylogenetic Comparative Models: the SPLITT C++ Library

    Venelin Mitov, Tanja Stadler , Methods in Ecology and Evolution ,  2019
    Shell

    Free

  • Towards an ecological trait-data standard

    Florian D. Schneider, David Fichtmueller, Martin M. Gossner, Anton Güntsch, Malte Jochum, Birgitta König-Ries, Gaëtane Le Provost, Peter Manning, Andreas Ostrowski , Methods in Ecology and Evolution ,  2019
    R

    Free

  • Data from: A comparative analysis of common methods to identify waterbird hotspots

    Allison L. Sussman, Beth Gardner, Evan M. Adams, Leo Salas, Kevin P. Kenow, David R. Luukkonen , Methods in Ecology and Evolution ,  2019
    R

    Free

  • Estimating Diversification Rates on Incompletely Sampled Phylogenies: Theoretical Concerns and Practical Solutions

    Jonathan Chang, Daniel L Rabosky, Michael E Alfaro , Methods in Ecology and Evolution ,  2019
    Python

    Free

  • A package for motif analyses of bipartite networks

    Benno I. Simmons, Michelle J. M. Sweering, Maybritt Schillinger, Lynn V. Dicks, William J. Sutherland, Riccardo Di Clemente , Methods in Ecology and Evolution ,  2019
    R

    Free

  • Plants In Trait Analysis (PITA)

    Nicole Diaz; Jordan Holmes , Methods in Ecology and Evolution ,  2019
    Shell

    Free

  • Fast evaluation of study designs for spatially explicit capture–recapture

    Murray G. Efford, John Boulanger , Methods in Ecology and Evolution ,  2019
    R

    Free

  • Using taxonomic consistency with semi-automated data pre-processing for high quality DNA barcodes

    Björn Rulik, Jonas Eberle, Laura von der Mark, Jana Thormann, Manfred Jung, Frank Köhler, Wolfgang Apfel, Andreas Weigel, Andreas Kopetz, Jonas Köhler, Frank Fritzlar , Methods in Ecology and Evolution ,  2017
    R

    Free

  • BA3-SNPs: Contemporary migration reconfigured in BayesAss for next-generation sequence data

    Steven M. Mussmann, Marlis R. Douglas, Tyler K. Chafin, Michael E. Douglas , Methods in Ecology and Evolution ,  2019
    Python

    Free

  • pavo2: New tools for the spectral and spatial analysis of colour in r

    Rafael Maia, Hugo Gruson, John A. Endler, Thomas E. White , Methods in Ecology and Evolution ,  2019
    R

    Free

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